Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00428 ATGGCACTAATGCAGCGCCTAGCTAGAACAGCACGCCCCCTCCGAACCCTAACCTCTCGCCCCCTTTCCCCTCACAAATCAGCACTTGCTTCATTCGCCGTGCCTCGAGTTTTGGGATCCGGACCCTCACGTGACGATGACTATCAGGCACCGTATTCGTTGCTTCCGGCTGTGTTAGCTGGCGCTTTCGGAATTGGATTGGCGGAGACGGTGTATGCTGATGCCGGTCGCGGTGGCGTTGGCGGCGCTGAGGATGTGCACGCTGTTGCGAAGAAAGAACGCGAGCGCATTGAGGAGTTGCTTAGGAAGAAAGGAGTTCGTTATGGTTCTTATCCTCGCTTCACTGTTGCTGTTAAAGGACAAAAGGTCAGCGTTAAGTTTCAAATACCTCCTGCCTGTGAAGTCCCGCAACTTATTGCAAATCTCGCAACAAATCTTGGACTGAAAGCTGAAGGGAACGGAGGTGGATCGGATATGCTATTGCGATCTTGGGACAGCACAGTGGCTTGGCAGCTTGCCCTTACTCATCCGTCCAAGAAAAAGCATATTGAAGGGGATGATCCATCTTCAATAGATATGAATGGACATGATGGAGATCTTTGCATACTCTTTTTTCATTCTCTCATTGGCTCAGATAAAGCTGAAATTGAACTTATTAAGCAAGGGAACTTGAGTCCTGAAGAGCTTGATGCTTTCGTCTCTGTTTTACAATTAGCTGGTAGCAAGATGGGACAAAGAAGTGCCCCCCTGGAAAGGAAGTCAAGGGAAGAGACTGAACAGTCGCCATCTGTAGATAAATCTATTTCTAGTCTTGAGGCCATGGGACTGAGAATTTATGGATTGAATGAACCCATTGGTATATCAAATGGTGAGGTATCATGGGACAACATTGCTGGATATGAACATCAAAAACGAGTAATAGAAGATACAATACTGTTGGCTTTGCATAGTCCTGAAGTATATGACAATATTGCACGAGGGACTCGTCAAAAGTTTGAATCAAACCGGCCTCGAGCTGTGCTGTTTGAAGGTCCACCAGGTACAGGGAAAACTTCTTGTGCTCGCGTTATTGCCAATCAAGCAGGTGTCCCTTTGTTATATGTTCCACTTGAGGCTGTAATGTCTGAATACTACGGTAAAAGTGAACGCCTTCTGGGAAAAGTGTTTTCACTTGCAAATGAACTTCCTAATGGTGCTATTATATTTCTGGATGAGATTGATTCTTTTGCTGCTGCTCGGGATAATGAAATGCATGAAGCTACAAGGAGAATATTGTCAGTGTTGTTACGACAGATAGATGGCTTTGAGCAGGATAAGAAAGTGGTCGTGATTGCTGCTACCAATAGAAAGGAAGACCTTGATCCTGCATTAATCAGCCGATTTGATACTATGATCCCTTTTGGCTTACCTGATCACCGTAATCGTCAGCAAATAGCATCCAAATATGCAAAGCACCTAACCAAACCTGAACTAGATGAACTTGCCAGAGCTACAGAAGATATGTCCGGAAGAGACATTCGTGATGTTTGTCAGCAAGCAGAACGATCATGGGCATCAAAGATTATTCGAGGGCAAGTATCCAAAGATGGTGAACAAGAAAGTCTTCCACCTTTGCAAGAGTATATAGAGTGCGCCACAATTCGGCAAAACTCACTGCTCAGTGCTGCTGCTGGCAGGAATTTCCGAAATTTTCCCCATCTTAGGATGGCAACCGACTGA 1719 0.4549 MALMQRLARTARPLRTLTSRPLSPHKSALASFAVPRVLGSGPSRDDDYQAPYSLLPAVLAGAFGIGLAETVYADAGRGGVGGAEDVHAVAKKERERIEELLRKKGVRYGSYPRFTVAVKGQKVSVKFQIPPACEVPQLIANLATNLGLKAEGNGGGSDMLLRSWDSTVAWQLALTHPSKKKHIEGDDPSSIDMNGHDGDLCILFFHSLIGSDKAEIELIKQGNLSPEELDAFVSVLQLAGSKMGQRSAPLERKSREETEQSPSVDKSISSLEAMGLRIYGLNEPIGISNGEVSWDNIAGYEHQKRVIEDTILLALHSPEVYDNIARGTRQKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLEAVMSEYYGKSERLLGKVFSLANELPNGAIIFLDEIDSFAAARDNEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDTMIPFGLPDHRNRQQIASKYAKHLTKPELDELARATEDMSGRDIRDVCQQAERSWASKIIRGQVSKDGEQESLPPLQEYIECATIRQNSLLSAAAGRNFRNFPHLRMATD 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00428 572 CDD AAA 329 469 - -
Adu04g00428 572 MobiDBLite consensus disorder prediction 244 267 - -
Adu04g00428 572 ProSitePatterns AAA-protein family signature. 441 460 IPR003960 GO:0005524|GO:0016887
Adu04g00428 572 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 24 555 - -
Adu04g00428 572 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 291 520 IPR027417 -
Adu04g00428 572 Gene3D - 470 531 - -
Adu04g00428 572 Gene3D - 291 469 IPR027417 -
Adu04g00428 572 SMART AAA_5 336 471 IPR003593 -
Adu04g00428 572 Coils Coil 83 103 - -
Adu04g00428 572 Pfam ATPase family associated with various cellular activities (AAA) 340 468 IPR003959 GO:0005524|GO:0016887
Adu04g00428 572 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 24 555 - -
Adu04g00428 572 MobiDBLite consensus disorder prediction 248 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00428 Adu-Chr4 5101995 5108441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00428 336 536 Calmodulin-binding Proteins AT3G56690 36.364 1.49e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00428 - - gmx:100803362 832.017