Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00410 ATGGACAAGGGATGGGGTCTCACCCTTGAAACTTGTTCCTCTCCAACCATCCCATTCTTTCATTCTTCTTCGGCTGCTGCTTCTTCTTCTTCTTCACATAAGAATAAGATGTTTCCGCTGTTGGGATTCCCCGTCAACCTTACTCGCCCTGCCGATGATCATAACAACGATGACAGTAACCGCAAGGTGGTTGTTGACTTCTTCTCCGATAACAGGAACAAGGCACAAGAGCAGCAGCATGTTAAGCCCAACATCTCCGTCAAGAAGGAGATTCCCCACCATGATGATATACCTTCGTCCGCCACAACGGGTTTGCAACTGCTTACTGCCAACACTGGAAGCGATGAATCTACGGTGGATGATGGTGGAGTAGTATCATCAGATGGTGAAGATAAGAAAGCCAAGGCAATTGAGCTAGCGATGTTGCAAGTGGAGCTTGAACGCATGAACAACAGCAACAAGAACAACACACCTCACGCCCAAGTTGGAATCAGGAATAATAGCAATGGAAAGAACGAGAGGGAAGACAGTCCAGATTCACAATCACAAGCTTGGGGTCCCGCTCCCAACAAGCTCCAAAAACCCAACCCCACCATGGACCAATCCTCTTCTGAAGCCACCATGAGAAAAGCCCGTGTCTCGGTCCGTGCTCGCTCAGAAGCTCCCATGATCAGTGATGGATGCCAGTGGAGAAAATATGGACAAAAAATGGCAAAGGGAAATCCATGTCCTCGAGCTTATTACAGATGCACTATGGCAGTTGGTTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCTGAGGACAGAACTATTTTGGTAACTACATATGAAGGAACACACAGCCATCCGCTGCCACCGGCAGCCATGGCCATGGCATCAACCACCACAGCAGCTGCCACCATGTTACTATCAGGTTCCATGTCAAGTGCAGATGGAATCATGAACCCAAACCTCCTAGCAAGAGCTATTTTTCCATCGTGCTCTACTTCTACTTCTTCAAGCATGGCAACACTCTCAGCTTCGGCACCATTCCCAACTGTCACATTGGACCTCACACAAAACCCATCATCATCAAATAATACTAATAATACTTCCACTCCTCCAATAAGGCATCATCATCCTCTTAATGCTGTCCCTTTGTTCCAGCTACCCAATTTCCAAGGCCACCCCCAGAACTTTGGGACTCAAGCCCTATATAATCAATCAAAATTCTCCGGTCTTCAATTGTCTCAACAAGTTGCTGCCTCTTCCCAATTGGGAATCCAAGCTTCAAGGCCACCTTTGCAGCACAACCAACCACAACAACAGCCACCATCGCTGGCTGATTCCGTCACCGCAGCCATCACCACCGATCCTAACTTCACCGCCGCTATTGCAGCCGCCATCTCCTCCATCATCGGAGGTAACAATAATAATAATCAAGCAAACAGCACTGCGGACGGTAACAACAACAACAGCGGCAGCAATCCTAGTATGAGCAACAGGACAACAATTAGCAGCTTTTCGGGGAATTAA 1515 0.4792 MDKGWGLTLETCSSPTIPFFHSSSAAASSSSSHKNKMFPLLGFPVNLTRPADDHNNDDSNRKVVVDFFSDNRNKAQEQQHVKPNISVKKEIPHHDDIPSSATTGLQLLTANTGSDESTVDDGGVVSSDGEDKKAKAIELAMLQVELERMNNSNKNNTPHAQVGIRNNSNGKNEREDSPDSQSQAWGPAPNKLQKPNPTMDQSSSEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILVTTYEGTHSHPLPPAAMAMASTTTAAATMLLSGSMSSADGIMNPNLLARAIFPSCSTSTSSSMATLSASAPFPTVTLDLTQNPSSSNNTNNTSTPPIRHHHPLNAVPLFQLPNFQGHPQNFGTQALYNQSKFSGLQLSQQVAASSQLGIQASRPPLQHNQPQQQPPSLADSVTAAITTDPNFTAAIAAAISSIIGGNNNNNQANSTADGNNNNSGSNPSMSNRTTISSFSGN 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00410 504 MobiDBLite consensus disorder prediction 469 504 - -
Adu04g00410 504 MobiDBLite consensus disorder prediction 179 209 - -
Adu04g00410 504 Pfam WRKY DNA -binding domain 226 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g00410 504 MobiDBLite consensus disorder prediction 349 370 - -
Adu04g00410 504 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 47 154 IPR044810 GO:0003700
Adu04g00410 504 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 168 479 IPR044810 GO:0003700
Adu04g00410 504 MobiDBLite consensus disorder prediction 110 130 - -
Adu04g00410 504 SMART WRKY_cls 224 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g00410 504 MobiDBLite consensus disorder prediction 150 168 - -
Adu04g00410 504 MobiDBLite consensus disorder prediction 349 371 - -
Adu04g00410 504 SUPERFAMILY WRKY DNA-binding domain 217 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu04g00410 504 ProSiteProfiles WRKY domain profile. 219 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu04g00410 504 Gene3D WRKY domain 209 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu04g00410 504 MobiDBLite consensus disorder prediction 150 218 - -
Adu04g00410 504 PANTHER WRKY TRANSCRIPTION FACTOR 6 47 154 - -
Adu04g00410 504 PANTHER WRKY TRANSCRIPTION FACTOR 6 168 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00410 Adu-Chr4 4823085 4825100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00410 168 485 WRKY Transcription Factor Family AT1G62300 57.910 2.96e-102 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu04g00410 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00410 - - ccaj:109803638 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00410 04 4823085 4825100 Adu04g00410 04 4823085 4825100 ECH
Adu08g01539 08 25611502 25613162 Adu04g00410 04 4823085 4825100 ECH
Adu03g01144 03 12693170 12695511 Adu04g00410 04 4823085 4825100 ECH