Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00397 ATGAAGAGTGAAGACGAGCGCGTTCTCATAATCGTCAAAAGTTCACCAACTACAAGTATGTCAGCGTCATCATCATCTTCTTCTTCTTCTTGTTCTTCTTTCTCTCTAGCTAGCAGTGGTGAGCCTTTGTCAACAGCTCTAAGCTTGAAGGCACCAATGGTTAGGCCTTATGTCAGATCCAGAATGCCTCGAATTTGTTGGACACCAGATCTCCACCGTTGCTTCCTGCATGCAATCCAACGGCTTGGAGGAGTTGATAGGGCGACGCCAAAGATGGTTATGCAGCTTATGAATGTTAAGGGGGTTACCATATCTCATGTTAAAAGCCACCTACAGATGTACAGGAGCGTGAAGCAGGAAGAGATGAAACAAGCCGAAAGGAAGAAGAAAATAACGGCATCAAAAGAATTGCTGCTGCTTTCTTCATTGTCGTCGTCAAGCATTAAACCATTAAGGTGGACCGGTCAACAGAGTCTTCAGCAAGGGAGCTATGGAATTAGTTATTATACCGAAGAATTTGCTCGCACCAGACTCCAAGATCTTTGGAATGAGCAGCAGCAGCAAGAGTCTCAGAATTATGCAAAGCTAGGGAGTAATCAGTCTACTATAGTTTGTAAGGAGAATGATGAACAGAAGACTCACACTTACATCATTTTCCGAGATATTCTCACACCCCACACTGCCCAAGGGAACAATAAGGATGGTGGGGGTAGAAAGGTGTCATCATCAGAAGAGATTGGTACAAGTAGCAGATTCGAAGATAGAAGCGAGAAAGGAAAGAGAGTGAGAGTGTGTGATGAAGGAAAAAACAACATGGCGTCTCTGTCACAGATGATGAGTCCAGTTAGGAATGATATCTCCCTTGAGCTCAAGCTTTCTTTATCACATCATCATCATATGCCATAG 906 0.4371 MKSEDERVLIIVKSSPTTSMSASSSSSSSSCSSFSLASSGEPLSTALSLKAPMVRPYVRSRMPRICWTPDLHRCFLHAIQRLGGVDRATPKMVMQLMNVKGVTISHVKSHLQMYRSVKQEEMKQAERKKKITASKELLLLSSLSSSSIKPLRWTGQQSLQQGSYGISYYTEEFARTRLQDLWNEQQQQESQNYAKLGSNQSTIVCKENDEQKTHTYIIFRDILTPHTAQGNNKDGGGRKVSSSEEIGTSSRFEDRSEKGKRVRVCDEGKNNMASLSQMMSPVRNDISLELKLSLSHHHHMP 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00397 301 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 17 294 - -
Adu04g00397 301 SUPERFAMILY Homeodomain-like 61 119 IPR009057 -
Adu04g00397 301 MobiDBLite consensus disorder prediction 248 262 - -
Adu04g00397 301 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 63 116 IPR006447 GO:0003677
Adu04g00397 301 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Adu04g00397 301 Gene3D - 62 119 - -
Adu04g00397 301 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 17 294 IPR044848 GO:0003700
Adu04g00397 301 MobiDBLite consensus disorder prediction 227 247 - -
Adu04g00397 301 MobiDBLite consensus disorder prediction 227 262 - -
Adu04g00397 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 119 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00397 Adu-Chr4 4729111 4731809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00397 54 120 G2-like Transcription Factor Family AT2G42660 68.657 2.99e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu04g00397 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00397 - - adu:107482892 523.857