Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00368 ATGAGTTGCCTCAATTGCTGCAAGACTGCTGAGGTCGAATCGCCGTCTTACCGGGAAGCGTTGGCAGAGAGTGCAAAACGGAGAATGTCCAGAGGCTATATAACATTCAAATCATTAGCAGCCGCTGTGTCACTCAAAACAGGTAGCAGCAAGCATAGACAAATCAATGAACAGATTAAAAAATACGGAGAAGTGAAGAATGATATCAAGGTGTTCACATACAATCAAATTGCTGAAGCAACAGAAAATTTCAATTCTGATAACCTTCTTGGAGAAGGAGGATTTGGTTCTGTCTACAAAGGTTACATATGTGATCAGCATGTAGCAATGAAGCAACTGAACAGGCAAGGAGCACAAGGAACAAGAGAATTTTATGCAGAGGTTTTGATGCTAAGTTTGGTGAAGCATCCAAACCTTGTACAGCTAGTTGGTTATTGTACAGAAGATGAACATAGGGTTTTGGTCTATGAGTACATGGCCAAAGGAAGCTTGGAAAATCACCTCCTAGACCTAGGCGAGGGTAAGAAGCCTTTGGATTGGCACACAAGGATGAAAATTGCTGAGggagcagccagagggcttgagtatttgcatagctctgcagatcctccggttatatatcgtgatttcaagtcatctaatatactattagacgaagatttcaatgcaaaactttccgattttggactagctaagattgctccaaatggtcagggaactatcacatctagggtgatgggaacctttggctactgtgcaccagaatatgcttctggtggtcaactaaccacaaaatcagatgtttacagttttggtgtggtgttcttggaaataatcactggcaggaGAGTAATTGACACTACAAGAGATATTGAGGAGCAAAACTTGATTGAATGGGCACAACCTCTTCTCAAGGATAAGAAGCAGTTCAGTCTAATTGCTGATCCTTTGCTTAATGGCCAGTTCCCTGCAAAGGGTCTATTTCAAGCACTTGCAGTGGCAGCAATGTGTCTCCAGGAGGATCCTGAGAAACGACCTGACATGGACGATGTTGTAACGGCTCTAGCAATTCTATCAGCGACCAAGACCGACGAAAAAGATGGTGCTGGCGAAGCAGTAAAAACTGGCGGGCATGTCGAATCTTTCAGAGCAGCAGAATCATTCAACAAGGAAGAGCAAAGGGGATAG 1188 0.3316 MSCLNCCKTAEVESPSYREALAESAKRRMSRGYITFKSLAAAVSLKTGSSKHRQINEQIKKYGEVKNDIKVFTYNQIAEATENFNSDNLLGEGGFGSVYKGYICDQHVAMKQLNRQGAQGTREFYAEVLMLSLVKHPNLVQLVGYCTEDEHRVLVYEYMAKGSLENHLLDLGEGKKPLDWHTRMKIAEGAARGLEYLHSSADPPVIYRDFKSSNILLDEDFNAKLSDFGLAKIAPNGQGTITSRVMGTFGYCAPEYASGGQLTTKSDVYSFGVVFLEIITGRRVIDTTRDIEEQNLIEWAQPLLKDKKQFSLIADPLLNGQFPAKGLFQALAVAAMCLQEDPEKRPDMDDVVTALAILSATKTDEKDGAGEAVKTGGHVESFRAAESFNKEEQRG 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00368 395 Pfam Protein kinase domain 85 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00368 395 Gene3D Transferase(Phosphotransferase) domain 1 159 368 - -
Adu04g00368 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Adu04g00368 395 Gene3D Phosphorylase Kinase; domain 1 44 158 - -
Adu04g00368 395 ProSiteProfiles Protein kinase domain profile. 84 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00368 395 ProSitePatterns Protein kinases ATP-binding region signature. 90 111 IPR017441 GO:0005524
Adu04g00368 395 PANTHER OS07G0668900 PROTEIN 1 390 - -
Adu04g00368 395 SUPERFAMILY Protein kinase-like (PK-like) 67 356 IPR011009 -
Adu04g00368 395 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 390 - -
Adu04g00368 395 CDD STKc_IRAK 90 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00368 Adu-Chr4 4322068 4324970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00368 46 358 Glycoside Hydrolase AT3G07070 60.436 6.78e-134 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Adu04g00368 Pkinase 9.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00368 - - var:108343506 539.65