Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00354 ATGTTCATCATGGAATTGACAATGAGGGCTTGGAATAATGCTGAAGAGAATAAAAGGAGAACACTTCAGAAGAATGACATTGCTGCTGCAGTCACAAAAACTGAGGTGTTTGATTTTCTTGTTGATGTTGTCCCTAGAGATGAAACCGTGGACCTTGGTTTATATGCTGGTATAAGAAGAGGTGGAGGCAATAATAATATTGTTCCTTGCTACTATTATGTGCCACCTCAGCATGTTATGGGTCCACCACCATATGGTCCTCCAAGAGTGCCTATGGTGGGAAGACATGTTCCTAATCAAGATAATATTAATGAGCAGCAAAATAGTGAAAATACTACTCATGCTATGTGTCCAAAGGAGCAAAATCATTCTTCAGATTCAGATGAATGA 390 0.3923 MFIMELTMRAWNNAEENKRRTLQKNDIAAAVTKTEVFDFLVDVVPRDETVDLGLYAGIRRGGGNNNIVPCYYYVPPQHVMGPPPYGPPRVPMVGRHVPNQDNINEQQNSENTTHAMCPKEQNHSSDSDE 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00354 129 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 126 - -
Adu04g00354 129 Pfam Core histone H2A/H2B/H3/H4 2 31 IPR007125 GO:0003677
Adu04g00354 129 Gene3D Histone, subunit A 1 46 IPR009072 GO:0046982
Adu04g00354 129 SUPERFAMILY Histone-fold 1 46 IPR009072 GO:0046982
Adu04g00354 129 MobiDBLite consensus disorder prediction 85 129 - -
Adu04g00354 129 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 1 126 - -
Adu04g00354 129 MobiDBLite consensus disorder prediction 99 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00354 Adu-Chr4 4166945 4167459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00354 1 80 CCAAT-HAP5 Transcription Factor Family AT1G56170 58.025 1.31e-26 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Adu04g00354 Histone 4.1e-06 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00354 K08066 - aprc:113855583 100.523