Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00327 ATGATTATCTCGGTATCTGGCTCCTCAGCTTGCAAACAAGTACAAGAGCCTCTAGTAAGTTTCCAAAAGGGATTTACAAACATGTTATATAATCGGAACAATAATAATAAGGATAAGGTGGTGGTGATATTGGGGGCCACCGGAACCGGAAAGACCAAGTTGGCCATAGACCTTGCCAACCACTTCCCACCGGCTGAGATTGTTAACTCCGACAAAATGCAAGTCTACAAGGGCCTTGACATCACCACTAATAAGGTTACTCCTCAAGAGGCTCGTGGGGTCCCACATCATCTACTTGGCACAATTCACCCCAATGCCAACTTCACCGCCCATGATTTTTGCCGCCAAGCCACCTCCGCCGTCGATTCCATCGTTGCTCGAGATGCCCTCCCCATCATCGCCGGTGGCTCCAATTCCTATCTTGATGCTCTCATCAACCACCACTCCACCTTTAGATTAAGGTACGAGTGTTGCTTCCTATGGGTGGATGTTTCAATCCCCATACTGCATGCGTCGCTTCGATCACGCGTGGATCGCATGATCGAAGCGGGACAAGTGGAGGAAGTGCGGAAATTCTTCGAGCCATTGGCAGATTACGAGAGGGGAATAAGAAGAGCGATAGGGGTGCCAGAGTTCAACGAGTTTCTAAGAGCAGAGGCCTTAGGAGCAGATGAAGAGACAAAGAAGATGCTCTTAGACATAGCCATTGCAAGAATCAAGGTCAACAACTGCACCCTCGCCAATCGCCAAATCCACAAGATTCAGCGACTCCACAACACCTGGAAGAGGACCATGCATCGCCTCGACGCCACGCAGGTTTTCTTGAACCGTAATTCCTCTGATCATCACCAATCTCAAAATTCCTGGGAGGAGCATGTTCTTGCCAAGAGCCTTAGGATTCTTCACAACTTCCTCTACGAGGATAACAATAAACATCTTCTTGTTCCTTCCGGAATTAATGTTTCTTCTTCTTCGCCGCCGGTGGCAATGGCTGCCGTGGCCGCA 1005 0.4905 MIISVSGSSACKQVQEPLVSFQKGFTNMLYNRNNNNKDKVVVILGATGTGKTKLAIDLANHFPPAEIVNSDKMQVYKGLDITTNKVTPQEARGVPHHLLGTIHPNANFTAHDFCRQATSAVDSIVARDALPIIAGGSNSYLDALINHHSTFRLRYECCFLWVDVSIPILHASLRSRVDRMIEAGQVEEVRKFFEPLADYERGIRRAIGVPEFNEFLRAEALGADEETKKMLLDIAIARIKVNNCTLANRQIHKIQRLHNTWKRTMHRLDATQVFLNRNSSDHHQSQNSWEEHVLAKSLRILHNFLYEDNNKHLLVPSGINVSSSSPPVAMAAVAA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00327 335 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 166 265 - -
Adu04g00327 335 Pfam IPP transferase 153 252 - -
Adu04g00327 335 Pfam IPP transferase 74 148 - -
Adu04g00327 335 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 312 IPR039657 -
Adu04g00327 335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 198 IPR027417 -
Adu04g00327 335 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 25 312 - -
Adu04g00327 335 Gene3D - 37 305 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00327 Adu-Chr4 3792872 3794223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00327 154 305 C2H2 Transcription Factor Family AT2G27760 29.213 1.06e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00327 K10760 - gmx:100812928 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00327 04 3792872 3794223 Adu04g00327 04 3792872 3794223 ECH
Adu01g02747 01 97520892 97522340 Adu04g00327 04 3792872 3794223 PCT