Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00281 ATGGAGCCCCTCCCTTCTCTCCCTCCCCCTCTAAACAACAACAACAACAACAACAACATGGACGATTCTTCTTCAATTTGGGATCTTACTTATCTTCTCGATTTCAACCTCGACGATTTACCCCTTGACCCTCACCAACCATCTCAACCGTTGGATTTCGATCCTCCAGCTGCTCCCGATCCACACAATATTCCTCCTCCTTCTCCTCTTCCCGCCAACGACAAGGTTCGGAAACGCGACCCGAGGCTCACGTGCTCCAACTTTCTCGCGGGCCGGGTTCCATGTGCGTGCCCCGAGATAGATGCTCAGATCGAGAACGAGGGTCTCCCCGGCAAGAAGCGCGTGCGCACCGCTTCCGCCGCGCGTGGCTCACCCCCGACGGTTTGTTGCCAGGTTCCTGGCTGCGAGGTCGATATCACGGAGCTGAAGGGGTACCACCGGAGGCATAGGGTTTGCCTACGCTGTGCTAATGCTGCCACTGTTATGCTCGACGGCGAGGCCAAGAGATACTGTCAACAGTGTGGCAAGTTTCACGTGTTGTCGGATTTTGATGAAGGTAAACGTAGCTGTAGGAGAAAGTTAGAGCGCCATAACAATAGGAGGCGAAGAAAGCCAGCAGATTCAAGAGCTGAAGCTGCTCATGAACCTCTACCCGTTGCACAAAATGAGGATTCAAATAATGACGGGGAAACAGGAAAAGGTTTAGATTCTTCAAATTTGAGTTGTGAAATAAATGAAAAAGAAGTGTCGCTGGATCTCGAAGATGAACCAGTTGCCAATCTGAACTCAGCTCCTGATATGCAGAATATTACAAATGACAGTGTTATGACTTTTCTTGCTTCTGGGGAAACACAAGTGAATAGTGGAAAAGATGCTTCCAACCTCTCTAACTCTCCCTCATATTGTGACAATAAGAGTGCTTATTCATCTTTGTGCCAAACAGGTCGGATTTCTTTCAAGCTTTATGATTGGAACCCTGCAGAATTTCCCAGAAGGCTACGCCACCAAATATTCCAATGGTTGGCGAGTATGCCTGTTGAGCTTGAGGGATATATCCGCCCAGGGTGTACGATCCTGACAATTTTTATCGCCATGCCAAAGAATATGTGGATAAATTTACAGGAAGACCCTATGTACTATGTGCGCGATCTTGTTGCTCCTGGAAAGTTCCTATCTGCAAGAGGCAATGCACTAATTTATCTGAATGATATGTTCTTCCGCATTATGAAAGATGGAACTTCTGTGACAAAAGTCAAGGTAAATATGCAGGCACCAAGGCTTCACTATGTTCATCCCACATACTTTGAGGCTGGGAAACCTCTGGAGTTTGTTGCTTGCGGAAGTAACTTGATGCAGCCTAAGTTTCGGCTTCTTGTATCTTTTTCTGGAAAGTATCTGAAGTGTGAATATTGTGTTCCATCTCCACATAACTGGACTGGGAACAATATGTCATGTGCTTTTGAGAATCAGTTATACAAGATATATGTCCCTCATACAGAGGAAACTCTCTTTGGGCCTGCATTTATTGAGGTGGAGAATGAGGCTGGTTTATCAAACTTCATTCCTGTTCTCATTGGGGACAAAGAAATTTGCAGTGAGATGAGGACATTACAGCAAAGGTTAGATGAGTCTCTTCATTCTAAACAATTCCAGTCTACATCTGGTGGTTCTATCTGCAGCTTGTGTGAAGATTTTGCACATAGGCACACATCATCAGACTTGCTTGTAGATATAGCATGGTTGCTTAAGAACCCTACCTCAGAAAATTTTGAGAGAATGATGACGGCTTCACAAGTTCAAAGATACTGTTACTTGTTGGACTTTCTTATATGCCATGATTCAGTACTCATTTTGGAAAAAATATTACCAAAGTTGGTGATCTTTACAGAAGGCTTGAAATCAAATATTGTGATTAGTCGGACGAGTGATGTTGATGTGACACAACTACTGAATTGCATGCATCTTGCTAGAGATGTTATTAATCAGAATCATCAGAAAGGCAGAGGCATAGTTGTGCATTCTGAAACAGAAGGCTTTCGGATTGAGAAAACCTGCACCCAAGACAGCTTGCCATCAGTTTCGAGAATAAAAAGTCAGGATGTTCTATCCAGAACGGATTCAAAGTGTGGAATAATGAGAAGCCCAACATCTAATGACGAAATTGATAGGATACCACTTTTGAAGAGGGAGATTATAATGAATATGGAAGAGTTGCCTAAACGATCCAGCCGGCGATATGTCGGTAGGGGATTCTTGAGCTCTCGACCGGCAATGTTTGTGATTGTTTCGGTTGCTGTTTGTCTTGCAGTATGTGTAGCCGTCCTTCATCGGGGGAGGGTTAGTGAGTTAGCTGTATCCATTAGAAGGTGCTTGTTTAACTCTTAG 2385 0.4444 MEPLPSLPPPLNNNNNNNNMDDSSSIWDLTYLLDFNLDDLPLDPHQPSQPLDFDPPAAPDPHNIPPPSPLPANDKVRKRDPRLTCSNFLAGRVPCACPEIDAQIENEGLPGKKRVRTASAARGSPPTVCCQVPGCEVDITELKGYHRRHRVCLRCANAATVMLDGEAKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNNRRRRKPADSRAEAAHEPLPVAQNEDSNNDGETGKGLDSSNLSCEINEKEVSLDLEDEPVANLNSAPDMQNITNDSVMTFLASGETQVNSGKDASNLSNSPSYCDNKSAYSSLCQTGRISFKLYDWNPAEFPRRLRHQIFQWLASMPVELEGYIRPGCTILTIFIAMPKNMWINLQEDPMYYVRDLVAPGKFLSARGNALIYLNDMFFRIMKDGTSVTKVKVNMQAPRLHYVHPTYFEAGKPLEFVACGSNLMQPKFRLLVSFSGKYLKCEYCVPSPHNWTGNNMSCAFENQLYKIYVPHTEETLFGPAFIEVENEAGLSNFIPVLIGDKEICSEMRTLQQRLDESLHSKQFQSTSGGSICSLCEDFAHRHTSSDLLVDIAWLLKNPTSENFERMMTASQVQRYCYLLDFLICHDSVLILEKILPKLVIFTEGLKSNIVISRTSDVDVTQLLNCMHLARDVINQNHQKGRGIVVHSETEGFRIEKTCTQDSLPSVSRIKSQDVLSRTDSKCGIMRSPTSNDEIDRIPLLKREIIMNMEELPKRSSRRYVGRGFLSSRPAMFVIVSVAVCLAVCVAVLHRGRVSELAVSIRRCLFNS 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00281 794 MobiDBLite consensus disorder prediction 220 238 - -
Adu04g00281 794 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 22 792 IPR044817 GO:0003677
Adu04g00281 794 Gene3D - 121 191 IPR036893 GO:0003677|GO:0005634
Adu04g00281 794 SUPERFAMILY SBT domain 128 207 IPR036893 GO:0003677|GO:0005634
Adu04g00281 794 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7 22 792 - -
Adu04g00281 794 ProSiteProfiles Zinc finger SBP-type profile. 127 204 IPR004333 GO:0003677
Adu04g00281 794 MobiDBLite consensus disorder prediction 38 77 - -
Adu04g00281 794 MobiDBLite consensus disorder prediction 48 72 - -
Adu04g00281 794 Pfam SBP domain 130 204 IPR004333 GO:0003677
Adu04g00281 794 MobiDBLite consensus disorder prediction 1 23 - -
Adu04g00281 794 MobiDBLite consensus disorder prediction 194 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00281 Adu-Chr4 3280483 3286254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00281 8 788 SBP-box Gene Family AT5G18830 46.617 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Adu04g00281 SBP 7.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00281 - - gmx:100776034 1101.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00281 04 3280483 3286254 Adu04g00281 04 3280483 3286254 ECH