Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00261 ATGGCTTCAAATCAGATTCAGTCATCTACTACAATTCATGCAGGGGCAACTAATGATGCTTTATACAAGGAACTGTGGCATGCCTGTGCTGGACCTCTTGTCACTCTTCCTCGTGAAGGGGAAAGGGTTTATTACTTTCCACAAGGTCATATGGAACAGCTCGAGGCATCTATGAATCAAGGTTTAGAGCAGCAAATGCCTTCCTTTAATCTTCCATCTAAGATACTATGTAAAGTGGTCAATGTTCATCTTCGGGCTGAACCTGAAACCGATGAAGTATATGCACAGATAACTTTGCTTCCTGAAGCAGATCAAAGTGAGGTGGTAAGCCCTGATGATCCTCTGCCTGAGCCACCAAGGTGTACAGTCCATTCATTTTGCAAGACACTTACTGCTTCTGACACCAGCACCCATGGAGGTTTCTCTGTTCTTCGAAGACATGCGGATGATTGTCTGCCACCACTGGATATGTCTCAGCAACCACCATGGCAAGAATTGGTTGCAACTGATTTGCATGGGAATGAATGGCATTTTCGGCATATTTTTCGAGGGCAACCAAGACGCCACTTACTGACAACTGGTTGGAGTGTCTTCGTCAGTTCCAAAAAATTAGTGGCTGGTGATGCATTTATATTCTTAAGGGGTGAAAATGGAGAGCTCCGAGTAGGAGTTAGGAGGCTCATGAGACAGCAAAACAACATGCCATCTTCGGTTATATCCAGTCACAGCATGCATCTCGGTGTTCTGGCTACTGCATCTCACGCCATTGCCACCGGAACACTGTTTTCAGTATTTTACAAACCCAGAACAAGCCGGTCGGAGTTTATTGTGAGTATCAATAAATATCTTGAAGCTCGAAATCATAAACTCTCAGTTGGTATGAGATTCAAAATGAGATTTGAAGGTGATGAGGTTCCTGAAAGAAGGTTCAGTGGGACAATTGTTGGCGTTGGAGATAGCACATCATCAGTTTGGGCTGATTCTGAGTGGCGATCGTTGAAGGTTCAATGGGATGAACCATCGTCAATTTTGCGTCCTGATAGAGTTTCTCCATGGGAATTGGAGCCACTTGTATCTACCACCCCAGCAAACTCCCAGCCAGCCCAAAGAACAAAGAGATCGCGGCCTCCGATCCTGCCTTCACCAATGCCTGATTCATCAATGCAAGGTGTATGGAAACCACCAGTTGAATCTCCATCTTTCTCCTATCGCGAACATGGCCGAGACCTCTATCCATCACCTAAATTCAATTCTAATGCAGCCAAATTTCTTGGTTTTGGCGGGAATATCTCTGCACCCAACAAGTCCATATATTGGTCGAATAGGATGGAAAACTCTACAGAATCATTTTCACCTATAGCACTTAAAGAATCTGCTGAAAAGAGACAAGGCACTGGAAATGGCTGTAGACTCTTTGGAATTCAGTTACTTGACAATGCTCATGCAGAAGAAAGTTTGCCAACTGTCACCTTGTCAGTAAGGGTAGGTGATGATAGGTCTGTTCCATCTTTGGATGGTGAGTCTGATCAGCAGTCTGAACCATCAAATGTTAATCAATCGGATATTCCTTCTGCAAGTTGTGATGCTGAAAAATCATGCCTGCGGTCTCCCCAGGAGTCACAAAGCAGGCAAATAAGAAGCTGCACAAAGGTTCACATGCAAGGTATGGCTGTTGGAAGGGCTGTGGATTTGACAAGGTTTGATGGATATGAGGATCTGCTTTGGAAATTGGAAGAGATGTTTGACATCAAGGGTGAGCTCTGTGGATCTGAAAAGAAGTGGCAAGTTGTCTACACTGATAATGAAGATGACATGATGATGGTTGGAGATGATCCATGGCTGTAA 1845 0.4434 MASNQIQSSTTIHAGATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPSKILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVVSPDDPLPEPPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQNNMPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDEVPERRFSGTIVGVGDSTSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTTPANSQPAQRTKRSRPPILPSPMPDSSMQGVWKPPVESPSFSYREHGRDLYPSPKFNSNAAKFLGFGGNISAPNKSIYWSNRMENSTESFSPIALKESAEKRQGTGNGCRLFGIQLLDNAHAEESLPTVTLSVRVGDDRSVPSLDGESDQQSEPSNVNQSDIPSASCDAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLWKLEEMFDIKGELCGSEKKWQVVYTDNEDDMMMVGDDPWL 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00261 614 MobiDBLite consensus disorder prediction 358 394 - -
Adu04g00261 614 MobiDBLite consensus disorder prediction 358 372 - -
Adu04g00261 614 MobiDBLite consensus disorder prediction 498 524 - -
Adu04g00261 614 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 18 613 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu04g00261 614 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Adu04g00261 614 SMART B3_2 126 228 IPR003340 GO:0003677
Adu04g00261 614 Gene3D - 289 362 - -
Adu04g00261 614 SUPERFAMILY DNA-binding pseudobarrel domain 115 255 IPR015300 -
Adu04g00261 614 Pfam AUX/IAA family 543 613 IPR033389 -
Adu04g00261 614 MobiDBLite consensus disorder prediction 505 524 - -
Adu04g00261 614 SUPERFAMILY CAD & PB1 domains 548 613 - -
Adu04g00261 614 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Adu04g00261 614 Gene3D - 123 228 IPR015300 -
Adu04g00261 614 Gene3D - 541 614 - -
Adu04g00261 614 PANTHER AUXIN RESPONSE FACTOR 1 18 613 - -
Adu04g00261 614 CDD B3_DNA 124 226 IPR003340 GO:0003677
Adu04g00261 614 Pfam B3 DNA binding domain 126 226 IPR003340 GO:0003677
Adu04g00261 614 ProSiteProfiles PB1 domain profile. 546 614 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00261 Adu-Chr4 3067726 3072931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00261 14 613 B3 DNA Binding Superfamily AT1G59750 73.841 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Adu04g00261 AUX_IAA 4.1e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00261 K14486 - gmx:100793224 1116.68