Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00242 ATGTCCACCTTGGCCTTCACAACCCTCGTTGTTTCGGTTCTCTTTTCTCTCCTCTCTTGCTCTGCTTCTTCTTCAACCCTGCTCAGTGATTTCCATGCACTTGTTTCACTCAAACAAGGATTTCAATTCCCAAACCCAGCTCTCAATAACTGGAACACTTCCAATCCGGTCACCGTTTGTTCATGGACCGGAATTCAATGCCACCGGGGGAGAGTGGTTACCGTCGACTTAACAGATTTCAACCTCTTCGGCTCTGTTTCTCCTTCACTCTCTCAACTGGACAGCCTCATCCACCTATCCCTTTCCGGCAACAACTTCACCGGCGCCATTGACGTCAGCAACATGAGCAGCCTCAAGTTCCTCAACATCTCGAGCAACCAGTTCAGCGGCCACCTCCATTGGAACTACTCCACCCTCCATAGCCTCCAAGTTCTGGACGCCTACGACAACAACTTCACCTCCTTGCTTCCCGTGGGGCTTCTGAGTCTCAAGAAGCTGACATACTTGGATCTTGGCGGCAACTACTTGTACGGCGAAATCCCGCCTAGCTACGGCAGCCTGACGGGGCTAGAGTACCTTTCTCTGGCGGGAAACGACCTTCGGGGAAGAATCCCGGCGGAGTTAGGGAACCTAACGAAGCTGAGGGAGATATACTTAGGCTACTACAATTCCTTTGTAGGCGGCATTCCGGTGCAGTTTGGAAAACTGACGAGTTTGGTGCATATGGATCTCTCAAGTTGTGACTTGGACGGTTCAATTCCAAGAGAGTTAGGGAAGTTGAACCAACTTGACACTCTTTACCTCCACATTAACCAGCTCTCCGGTTCAATCCCGACGGAACTGTCAAACTTAACGGCTCTCGTGAATCTGGACCTCTCCAGCAATGCACTCAGCGGGGAGATTCCGGCGGAGTTCGCCAACCTCAGCCGACTCAAGCTCTTCAACCTCTTCTTGAACAGGCTTCACGGCTCCATACCGGACTACATTGCGGACTTCCCGGAGCTGGAAACGCTTGGCCTCTGGATGAACAACTTCACCGGCGAGATACCGTACGGCCTCGGCCTGAACGGGAAGCTACAGGTGCTTGACTTGTCGTCCAACAAACTCACCGGTGTGATTCCTCCTCACCTTTGTTCCTCTAAGCAGCTAAGAATCCTGATTCTCCTCGACAATTTTCTCTTTGGACCCATCCCCGACGGTTTCGGAACGTGTTATAGTCTCACCAGAGTGAGGTTAGGAGAGAATTACCTCAACGGAACCATCCCTAACGGCTTTCTTTACCTTCCTAAGCTAAACTTAGCCGAGTTACAGAACAACTACCTCACCGGAACCTTGACGGAGAATTCCAATAGCTCCTCTCAGCCTCTTAATTTAGCCCAGCTTGATTTGTCAAACAATGCATTGTCCGGTCCACTACCCAATTCGCTTTCCAACTTCTCCTCTGTTCAGATCCTTTTGCTCAGCGGCAACCAATTCTCCGGTCCAATTCCGCCTTCCATTGCAGGACTCCGACAGGTACTCAAGCTTGATCTAAGCAGGAATTGGTTGTCCGGGGAAATTCCGCCGGAGATTGGGCACTGCGACCACCTTACCTACCTTGACATGAGCCAGAACAATCTCTCTGGCTCTATTCCTCCTCTCATAGCCAATATCCGCATTTTGAATTACCTCAACTTGTCAAGAAACCATTTGAACCAAAGCATCCCCAAATCAATAGGCACCATGAAGAGTCTCACCATTGCAGACTTCTCCTTCAATGAATTATCCGGTAAGTTACCGGAGTCAGGACAGTTTTCGTTCTTCAATGCTTCGTCTTTCGCAGGGAACCCTCAACTGTGCGGGTCTCTGCTCAACAACCCCTGCAACTTGAGCAGAATGACATCCCAGCAGGGAAAACGCTCTCCGGATTTCAAATTAATATTTGCGCTGGGGCTGTTGATCTGCTCCCTGGTGTTTGCAGTTGCAGCCATCATAAAGGCGAAGTCGTTCAAGAAGAATGGAGCCGGTTCGTGGAAGATGACGGCATTCCAGAAGCTGGAATTCAGGGTGTCGGACATTCTAGAATGCGTGAAAGACGGGAACGTGATCGGAAAAGGAGGTGCCGGGATTGTTTACCACGGGAAGATGCCGAACGGAGTAGAGGTGGCAGTTAAGAAGCTACTGGGAATCGGTGCGAGCAGCCATGATCACGGGTTCCGAGCAGAGATTCAAACACTGGGGAACATAAGGCATAGAAACATAGTGAGGCTACTGGCGTTCTGCTCCAACAAGGAGACGAACCTGCTTGTGTACGAGTACATGAGGAATGGAAGCTTAGGAGAGGCGTTGCATGGGAAGAAGGGTGCGTTCTTGAATTGGAACTTGAGGTACAAAATCGCCATTGATTCTGCTAAGGGACTCTGTTACCTTCACCATGATTGTTCACCCTTGATTGTCCACCGTGACGTCAAGTCCAACAACATTTTATTGAATTCCAATTTCGAAGCCCACGTGGCGGATTTCGGTCTCGCTAAGTTCTTGGTGGACGGCGGCGCCTCCGAGTACATGTCTTCTATTGCCGGCTCCTACGGCTACATTGCACCCGAATATGCATACACACTGAGGGTAGACGAAAAGAGTGACGTGTACAGTTTTGGAGTAGTGGTGTTAGAGCTTCTAACCGGAAGGAAACCGGTGGGGGCAGAGTTCGGTGAAGGAGTGGATCTTGTGCAATGGTGCAAGAAAGCAACGAATGGACGGAAAGAAGAGGTTATGAACATAATTGATCAGAGGCTGAGCGTGGTCCCTAAAGAAGAAGCTATGCACCTTTTCTTCATTTCCATGCTCTGCTTAGAAGAGAACAGTGTGGAGAGACCAACCATGAGGGAAGTCGTTCAAATGCTTTCTGAGTTCCCTCGCTCTTCCTTCTCTCCTCACTTACACCAATCTTCTTCCTCTCAATTACCTCCCAAACACAAACCTCCTACTTCTAATAATAAACATCTTTTGCTTTAA 2994 0.4957 MSTLAFTTLVVSVLFSLLSCSASSSTLLSDFHALVSLKQGFQFPNPALNNWNTSNPVTVCSWTGIQCHRGRVVTVDLTDFNLFGSVSPSLSQLDSLIHLSLSGNNFTGAIDVSNMSSLKFLNISSNQFSGHLHWNYSTLHSLQVLDAYDNNFTSLLPVGLLSLKKLTYLDLGGNYLYGEIPPSYGSLTGLEYLSLAGNDLRGRIPAELGNLTKLREIYLGYYNSFVGGIPVQFGKLTSLVHMDLSSCDLDGSIPRELGKLNQLDTLYLHINQLSGSIPTELSNLTALVNLDLSSNALSGEIPAEFANLSRLKLFNLFLNRLHGSIPDYIADFPELETLGLWMNNFTGEIPYGLGLNGKLQVLDLSSNKLTGVIPPHLCSSKQLRILILLDNFLFGPIPDGFGTCYSLTRVRLGENYLNGTIPNGFLYLPKLNLAELQNNYLTGTLTENSNSSSQPLNLAQLDLSNNALSGPLPNSLSNFSSVQILLLSGNQFSGPIPPSIAGLRQVLKLDLSRNWLSGEIPPEIGHCDHLTYLDMSQNNLSGSIPPLIANIRILNYLNLSRNHLNQSIPKSIGTMKSLTIADFSFNELSGKLPESGQFSFFNASSFAGNPQLCGSLLNNPCNLSRMTSQQGKRSPDFKLIFALGLLICSLVFAVAAIIKAKSFKKNGAGSWKMTAFQKLEFRVSDILECVKDGNVIGKGGAGIVYHGKMPNGVEVAVKKLLGIGASSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGEALHGKKGAFLNWNLRYKIAIDSAKGLCYLHHDCSPLIVHRDVKSNNILLNSNFEAHVADFGLAKFLVDGGASEYMSSIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVVLELLTGRKPVGAEFGEGVDLVQWCKKATNGRKEEVMNIIDQRLSVVPKEEAMHLFFISMLCLEENSVERPTMREVVQMLSEFPRSSFSPHLHQSSSSQLPPKHKPPTSNNKHLLL 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00242 997 Pfam Leucine Rich repeat 526 542 IPR001611 GO:0005515
Adu04g00242 997 SMART LRR_typ_2 551 575 IPR003591 -
Adu04g00242 997 SMART LRR_typ_2 187 211 IPR003591 -
Adu04g00242 997 SMART LRR_typ_2 357 380 IPR003591 -
Adu04g00242 997 SMART LRR_typ_2 284 307 IPR003591 -
Adu04g00242 997 SMART LRR_typ_2 503 527 IPR003591 -
Adu04g00242 997 SMART LRR_typ_2 163 186 IPR003591 -
Adu04g00242 997 SMART LRR_typ_2 139 162 IPR003591 -
Adu04g00242 997 SMART LRR_typ_2 236 260 IPR003591 -
Adu04g00242 997 SUPERFAMILY RNI-like 75 417 - -
Adu04g00242 997 Pfam Leucine Rich Repeat 358 378 IPR001611 GO:0005515
Adu04g00242 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Adu04g00242 997 ProSiteProfiles Protein kinase domain profile. 690 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00242 997 Pfam Protein tyrosine and serine/threonine kinase 693 961 IPR001245 GO:0004672|GO:0006468
Adu04g00242 997 Gene3D Transferase(Phosphotransferase) domain 1 767 978 - -
Adu04g00242 997 SUPERFAMILY L domain-like 357 614 - -
Adu04g00242 997 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Adu04g00242 997 PANTHER UNNAMED PRODUCT 4 970 - -
Adu04g00242 997 Gene3D Ribonuclease Inhibitor 28 178 IPR032675 -
Adu04g00242 997 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 4 970 - -
Adu04g00242 997 SUPERFAMILY Protein kinase-like (PK-like) 684 961 IPR011009 -
Adu04g00242 997 Gene3D Ribonuclease Inhibitor 179 265 IPR032675 -
Adu04g00242 997 Gene3D Phosphorylase Kinase; domain 1 654 766 - -
Adu04g00242 997 SMART serkin_6 690 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00242 997 MobiDBLite consensus disorder prediction 967 987 - -
Adu04g00242 997 Gene3D Ribonuclease Inhibitor 266 332 IPR032675 -
Adu04g00242 997 Gene3D Ribonuclease Inhibitor 333 624 IPR032675 -
Adu04g00242 997 MobiDBLite consensus disorder prediction 967 997 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00242 Adu-Chr4 2934245 2938241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00242 18 988 Receptor kinase-like Gene Family AT5G65700 56.798 0.0 1084
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu04g00242 PK_Tyr_Ser-Thr 9.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00242 - - cit:102612034 1508.81