Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00225 ATGGAAGTATCAGATTTGCAAAACAAGAAGAAGAAGCAGCAGAGCGGCAACAACAACAACAATAACAGCAACCTTGTGGTCCCCTTTGATGGAGCCACCACCGCCACCGGAAGGCCCTTCATCATGGGGGGGTCCATGTCTTCTTCAACTTCGTCGTCTTCTTCTTCATCCAATTCAACTTCTTCTTCCACCACCATCGACGCCAACCTCGCCATCGCCACCAGATCTGACGACAACCAGCTCCAGACTGCACCCAAGAGGTCCACCAAGGACAGGCATACAAAGGTCGACGGTCGAGGCCGCAGAATCCGAATGCCCGCCACATGCGCCGCTAGGGTTTTCCAGTTGACCAGAGAATTGGGACACAAGTCAGACGGAGAGACCATCGAGTGGCTTCTCCAGCAGGCTGAGCCTGCTATCATCGCCGCCACCGGCACCGGCACCATCCCCGCTAATTTCTCCACCCTCAACGTCTCTCTAAGAAGCAGCGGCTCCACGCTCTCCGCTCCGCCGTCCAAGTCCGCACCTCACACTTTCCACGCTGCAGCGTTGGCACTCGCTCACCACCATCCTTCTTACGAGGAAGCGTTTCACCAGCACACGGCGTTGCTAGGGTTTCACCCTCACCACGCGCAGCACCAGCACCTTATGACTGCTGACCAAATCGCAGAAGCGCTTCCCGGCGGCGCCGCCGACTCCAGCGAGAACTATATGAGGAAACGCTTCAGAGAAGACCTGTTCAAAGATGAGAGCAATCATCCGTCGGAGTCGCAGAACAATGAAAGTGGTGGTGCAGGTGCAGCTGCTGCCGATGGTTCTTCGCCAAAGCCGTTCAAAACCAACCTACAAATGCAGCTGCAACAACAGCAACCTCAACCAGAAGGAGGAGGAGGAGGTGGTGGTGGTGGTGGTTCTTCTGGACATGGACTTCTTCGCCAATCCAATTTGGTACCTGCCACTGCCATGTGGGCGGTAGCGCCCGCACCCGCCACCGCCGGTGCACCAGGCAGCACAATCTGGATGCTTCCAGTGACTGCTGGAGGTGCAGGTGGTGTGGCCACCGGTGCTGCAGCCTCGGAGGCGCAGATGTGGCCGTTTGCTCATCAGGGTGGCGGTGGCGGCGGCGGCGGCGGCGGCGGTGGTAACAACACGTTGCAAGGCCCACTACACTTGATGCCGAGGTTCAACCTTTCCCCCAGTGGCGGCGTTGAATTCCAGCAAGAGGGACGCGGTGGGCTTCAGCTGGGTTCGATGGTAATGCCGGCGGCGCAGCAACAGCAGCAGCCGCCGTCTCAGCATCTTGGATTAACGATGTCAGAATCAAACTTGGGAATGCTGGCTGCTTTGAATGCTTACACAAGAGCTGGTTTGAACATGAACATGAATATGAACATCAATTCTTCTTCTTCTCATCATCATCATCATCAACATCAGCCTCCTCCTCCTCCTCAGGCTGCAGACAGCGGGGAAGATGGTCCTAACAGCTCCCAATGA 1494 0.5669 MEVSDLQNKKKKQQSGNNNNNNSNLVVPFDGATTATGRPFIMGGSMSSSTSSSSSSSNSTSSSTTIDANLAIATRSDDNQLQTAPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHAAALALAHHHPSYEEAFHQHTALLGFHPHHAQHQHLMTADQIAEALPGGAADSSENYMRKRFREDLFKDESNHPSESQNNESGGAGAAAADGSSPKPFKTNLQMQLQQQQPQPEGGGGGGGGGGSSGHGLLRQSNLVPATAMWAVAPAPATAGAPGSTIWMLPVTAGGAGGVATGAAASEAQMWPFAHQGGGGGGGGGGGGNNTLQGPLHLMPRFNLSPSGGVEFQQEGRGGLQLGSMVMPAAQQQQQPPSQHLGLTMSESNLGMLAALNAYTRAGLNMNMNMNINSSSSHHHHHQHQPPPPPQAADSGEDGPNSSQ 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00225 497 MobiDBLite consensus disorder prediction 250 311 - -
Adu04g00225 497 PANTHER TRANSCRIPTION FACTOR TCP8 16 497 - -
Adu04g00225 497 MobiDBLite consensus disorder prediction 40 83 - -
Adu04g00225 497 MobiDBLite consensus disorder prediction 276 294 - -
Adu04g00225 497 ProSiteProfiles TCP domain profile. 89 143 IPR017887 -
Adu04g00225 497 MobiDBLite consensus disorder prediction 462 497 - -
Adu04g00225 497 Pfam TCP family transcription factor 88 205 IPR017887 -
Adu04g00225 497 MobiDBLite consensus disorder prediction 84 102 - -
Adu04g00225 497 MobiDBLite consensus disorder prediction 1 103 - -
Adu04g00225 497 MobiDBLite consensus disorder prediction 10 30 - -
Adu04g00225 497 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 16 497 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00225 Adu-Chr4 2823769 2826047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00225 86 366 TCP Transcription Factor Family AT1G35560 48.084 2.32e-60 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu04g00225 TCP 3.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00225 - - adu:107482753 745.347