Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00223 ATGGAAGATGAAAACATGGGAGAAGGAGAAGAGAAGTTTGAGTATGAAGAGGTTGTGAAAGCAACCGAGAACTTCAACCCTAAAAGGATGATAGGCAAAGGAAGCCATGGAATCGTGTACAAAGGTCTACTACCACGGACCGTGGCTGTGAAGAAAGCATCATCGCTAGATTCTCTCCACCATGATGATAACTCCAACAAGCTCCAAAACGAGATTCGAGTGCTGTCAATTCTACGTCAAAGCCCTCACGTGCTTAACCTTTTAGGCACGAGCCACGATTCCTTCGGGAACAAGCTCATGGTCATGGAGCTCTTGCCAAATGGCTCCCTCCACGACTGGCTTCACGGTTCGAGAAAACCGCCGCCGTCGTGGACGAAGCGCGTGGAAATCGCCATGCAGATCGCACGCGCGGTAGAGTTTCTCCACGAAGGGAAGCCTATGGTGATCCACAGGGACATCAAGTCCACCAACATCTTATTCGATTCTCACATGAACGCCAAGTTGGCGGACTTTGGACTGGCGGTTATGGTTGGATCGGTGGTTGAGTCACCACCGAGTCAACCCGCTGGGACAATAGGGTACATAGACCCGAGTTACACGAGTTCAGCAAAACTGAGCCCCAAGAACGACATCTTCAGCTTGGGGGTTGTGTTGTTGGAGATCATAAGCGGGAGAAAGGCCATAGACGTGTCGAAAACGCCGGCGTCGATCGTGGAATGGGCGGTTCCGTTGATTGAGAGGGAGGTTGTGGAAGAGATTTGTGACGGGAGGGTGGCGGTGCCGGCGTACATGGCGGGTGGAGTGGGTGAGATAGTTCGGTTGGGTGGACGGTGCGTGTCGGAGAAGGAAGAGGATCGTCCGTGTGCTCGGGAGGTGGTTATGAGAATAACGGACGTAGCGGAGCGTGTGAGGTACCCGTTATGGAGAAGCGTGGTAATGAGGAGCATCGCCGGCATGGTGGGATTCACGAGAAATAAGAGGAGCAAGTTGTTTCTCAATACTTCTTCTCACAACACGTCTTCCGTCATCACCGTTAAGCAAGTTTTATCGCTTTGGGATTGA 1062 0.5198 MEDENMGEGEEKFEYEEVVKATENFNPKRMIGKGSHGIVYKGLLPRTVAVKKASSLDSLHHDDNSNKLQNEIRVLSILRQSPHVLNLLGTSHDSFGNKLMVMELLPNGSLHDWLHGSRKPPPSWTKRVEIAMQIARAVEFLHEGKPMVIHRDIKSTNILFDSHMNAKLADFGLAVMVGSVVESPPSQPAGTIGYIDPSYTSSAKLSPKNDIFSLGVVLLEIISGRKAIDVSKTPASIVEWAVPLIEREVVEEICDGRVAVPAYMAGGVGEIVRLGGRCVSEKEEDRPCAREVVMRITDVAERVRYPLWRSVVMRSIAGMVGFTRNKRSKLFLNTSSHNTSSVITVKQVLSLWD 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00223 353 PIRSF ILK 3 315 - -
Adu04g00223 353 Pfam Protein kinase domain 27 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00223 353 ProSitePatterns Protein kinases ATP-binding region signature. 31 52 IPR017441 GO:0005524
Adu04g00223 353 Gene3D Phosphorylase Kinase; domain 1 10 104 - -
Adu04g00223 353 ProSiteProfiles Protein kinase domain profile. 25 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00223 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Adu04g00223 353 SUPERFAMILY Protein kinase-like (PK-like) 11 317 IPR011009 -
Adu04g00223 353 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00223 353 Gene3D Transferase(Phosphotransferase) domain 1 105 306 - -
Adu04g00223 353 PANTHER - 11 318 - -
Adu04g00223 353 PANTHER OS01G0750732 PROTEIN 11 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00223 Adu-Chr4 2805527 2806678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00223 13 287 Receptor kinase-like Gene Family AT3G59420 44.326 3.79e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Adu04g00223 Pkinase 4.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00223 - - lang:109334080 363.229