Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00217 ATGGATAATGCAGCTTCAGAAGCAGTTTTCTTACATGGCGACTTGGATCTCTGGATTCTTGAGGCAAAAGCTCTCCCGAATTTGGATCTTTCCACGGAGACTATGCGAAAATGCATTACCATGGGCAACAGCTGTTCCCCTCCCTTCGTGAAAGGGCTCAAGACACAGTCAGGGAGACACAAAATGATTACCAGCGACCCCTATGTGTCCGTGTGCCTCTCGGGGGCTACCATTGCTCAAACTAGGATCATTCCTAACTGTGAAAACCCTTTGTGGGACGAGCATTTCTTAATTCCGGTTGCTCACCCTGCTCAGAAATTGGAGTTCCATGTCAAAGACAATGATGTTCTTGGTGCTGAGCTCATTGGAGTAGTGGATATATCTGCTAACAAGATTTTGTCCGGAGGCATCATCGACGATTGGTTTCCAATCGTTGGCCAGAGTGGAAACTGCTTGAAACCCTATCCTGAGCTGCATCTGTCTATCCAATTTAGGCCAGTTGGGGCAGAAGAGACAGGTTCTCTTGGGGTTCCTGATACCTATTTTCCTCTCCGAAAAGGAGGGTCTGTCACCCTTTATCAAGATGCACATGTACCGGATGGTAAGCTGCCTGAGATTCCACTTGAGGATGGGAAGGTCTTTCAGCATGGCAAGTGTTGGGAAGAGATTTGCCAAGCCATTTTGGAAGCTCACAACCTCATATATATTATAGGGTGGTCGGTTTACCACCCAGTGAAGCTTATCAGGGAGCCATCAAAGCCCCTGCCTTCTCAGGCAGAGCTTTCACTTGGAGAGTTACTGAAATACAAGTCGCAAGAAGGGGTCCGCGTGGTCATGCTCATTTGGGATGACAAAACCTCTCATGACAAATTTCTTTTGAAAACTGATGGTGTCATGCAAACTCACGATGAACAAACTAGAAAGTATTTTAAGAACTCCACTGTGCATTGTGTGCTAGCTCCACGTTATGCAAGCAGTAAGCTCAGTGTTTTCAAGCAACAGGTTGTGGGAACCCTTTTTTCTCACCATCAGAAGTGTGTGCTGGTAGACACTCAAGCTTCTGGGAATAATCGGAAAATAACTGCTTTTATTGGTGGCTTGGATCTCTGTGATGGGAGATATGATACTCCTGAGCATCGGCTTTTCGATGATCTAGATACTGTCTTTCACAATGATTTTCGTAATCCTACATTCCCGTCGAATTCGCGTGGGCCAAGGTTGCCATGGCACGACTTGCATTGCAAAGTCGAGGGTCCAGCTGCATATGATATATTGATCAATTTTGAACAAAGATGGAGAAAAGCAAAAAAATGGCGTGATTTTCGGCTAAAAAAGGTGACAAAGTGGCATGAGGATGCTTTACTAAGCCTAGAACGCCTTTCTTGGATGCTCACTCCATCTTCGAGTCCTGATGGTGAGAAAGCTGTCTATGTAACCGATGAACATGATCCTGAGAGTTGGAATGTGCAGGTATTTCGGTCCATAGATTCAGGATCCGTCATGGGTTTCCCAAAGAGTGTTGAGCAAGCAAAGGCTCAGAACCTTTTCTGTGGAAAAAATTTGAAAGTAGATAAAAGCATTCATGCTGCTTATGTAAAAGCAATAAGATCAGCAGAACACTTCATCTACATTGAGAATCAGTATTTCCTGGGGTCCTCGTATAATTGGCATTCACACAAAGGTGCAGGTGCAAATCACTTGATTCCCATGGAATTGGCCTTAAAAATTGCCAGCAAGATCATCGCCAACGAACGTTTTTCTGCGTATATAGTTATACCAATGTGGCCAGAGGGAGTTCCTGGTAGTGTTGCTATTCAAGAAATTCTGTTCTGGCAGGGACAGACAATGTCTATGATGTACAAGATTGTTGCTGATGCTCTTAAAAAAGCAGGTCTTTCTCATCACTATCATCCTCAAGATTACCTCAATTTTTACTGTCTTGGAAAGCGTGAACCTTTGTCTTCAGATATTCCATTGCCAACTCAGACATCCGAAAATCGTGGTTTGAATTCATCCAAAAAATCAAGACGTTTTATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGACGAGTATGTTATCATGGGATCTGCAAATATTAATCAGAGATCCATGGATGGTTCAAGGGACACAGAAATAGCTATGGGTGCTTATCAGCCAAAATACACATGGAAAGAGAAGAATTCTCATCCACATGGCCAGGTGTATGGTTACAGAATGTCACTGTGGGCTGAGCACCTTGGTAGCCTTAAGGAAATATATGAAGAACCAAAGAGCCTAGAATGTGTTAGGTATGTGAACTATATAGCCAAACAAAACTGGGATGCATATGTATCAGAGGAAGGGAAGGAGCTGAGGGGACATTTGATGCAGTACCCGATTATGGTAGGCTCTGATGGAAAAGTGAGCCCGCTGCCAGATCATGAGTACTTTCCTGATGTTGGTGGTAAAGTTCTTGGATCACCCAATTCGCTTCCCGATGCACTAACCACATGA 2499 0.439 MDNAASEAVFLHGDLDLWILEAKALPNLDLSTETMRKCITMGNSCSPPFVKGLKTQSGRHKMITSDPYVSVCLSGATIAQTRIIPNCENPLWDEHFLIPVAHPAQKLEFHVKDNDVLGAELIGVVDISANKILSGGIIDDWFPIVGQSGNCLKPYPELHLSIQFRPVGAEETGSLGVPDTYFPLRKGGSVTLYQDAHVPDGKLPEIPLEDGKVFQHGKCWEEICQAILEAHNLIYIIGWSVYHPVKLIREPSKPLPSQAELSLGELLKYKSQEGVRVVMLIWDDKTSHDKFLLKTDGVMQTHDEQTRKYFKNSTVHCVLAPRYASSKLSVFKQQVVGTLFSHHQKCVLVDTQASGNNRKITAFIGGLDLCDGRYDTPEHRLFDDLDTVFHNDFRNPTFPSNSRGPRLPWHDLHCKVEGPAAYDILINFEQRWRKAKKWRDFRLKKVTKWHEDALLSLERLSWMLTPSSSPDGEKAVYVTDEHDPESWNVQVFRSIDSGSVMGFPKSVEQAKAQNLFCGKNLKVDKSIHAAYVKAIRSAEHFIYIENQYFLGSSYNWHSHKGAGANHLIPMELALKIASKIIANERFSAYIVIPMWPEGVPGSVAIQEILFWQGQTMSMMYKIVADALKKAGLSHHYHPQDYLNFYCLGKREPLSSDIPLPTQTSENRGLNSSKKSRRFMIYVHAKGMIVDDEYVIMGSANINQRSMDGSRDTEIAMGAYQPKYTWKEKNSHPHGQVYGYRMSLWAEHLGSLKEIYEEPKSLECVRYVNYIAKQNWDAYVSEEGKELRGHLMQYPIMVGSDGKVSPLPDHEYFPDVGGKVLGSPNSLPDALTT 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00217 832 Gene3D Endonuclease Chain A 475 731 - -
Adu04g00217 832 SUPERFAMILY Phospholipase D/nuclease 504 762 - -
Adu04g00217 832 Pfam PLD-like domain 680 714 IPR025202 -
Adu04g00217 832 ProSiteProfiles C2 domain profile. 1 142 IPR000008 -
Adu04g00217 832 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 338 373 IPR001736 GO:0003824
Adu04g00217 832 Pfam Phospholipase D C terminal 753 822 IPR024632 -
Adu04g00217 832 SMART pld_4 678 705 IPR001736 GO:0003824
Adu04g00217 832 SMART pld_4 338 373 IPR001736 GO:0003824
Adu04g00217 832 PANTHER PHOSPHOLIPASE D 5 832 IPR015679 -
Adu04g00217 832 Gene3D Endonuclease Chain A 212 456 - -
Adu04g00217 832 PANTHER PHOSPHOLIPASE D 5 832 - -
Adu04g00217 832 Pfam C2 domain 13 144 IPR000008 -
Adu04g00217 832 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 11 167 IPR035892 -
Adu04g00217 832 SMART C2_3c 14 141 IPR000008 -
Adu04g00217 832 PIRSF PLD_plant 1 832 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Adu04g00217 832 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 678 705 IPR001736 GO:0003824
Adu04g00217 832 Gene3D C2 domain 12 173 IPR035892 -
Adu04g00217 832 CDD C2_plant_PLD 8 165 - -
Adu04g00217 832 Pfam Phospholipase D Active site motif 339 373 IPR001736 GO:0003824
Adu04g00217 832 SUPERFAMILY Phospholipase D/nuclease 178 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00217 Adu-Chr4 2772484 2777118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00217 7 831 Phospholipase D Gene Family (Wang group) AT2G42010 53.418 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00217 K01115 - gmx:100779740 1400.57