Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00182 ATGCATACAAACTCTCAACCAGAAATCAAAATGCGCTGCTGTGCCCTTCCTAGTTCTTATCACCATCACCGATTAACATCGCCACCCAAAACAATTTTCCAATTCCCATCCAATACAACAACCCGCTACTATTCGCCCAAACCCGACATTATTACCAATCCGACCCGACCCGCGTTGCGACTGAGCCTCAGAGCAAATGCTTCTACGTCGTCGTTCGATGCGTTAGCGGTGGCGACGGAGGAAGCGAATGCGAGCTTGTACGAGGTTCTTGGCGTGCCGGAGTGGGTGGCGGTGGCGGAATTGAAGCAGGCGTACAAGAAGCTTGCGAGGAAGTTCCATCCGGACGTGTCGCCACCGGGTCGGGTTGAAGAGTACACAAGGAGGTTTATTCGTGTGCAGCAGGCCTACGAGACTCTCTCTGATCCCGCAATGAGAGAGCTCTATGATAGAGATATGGCTATGGCCGTCAAGTTCCCCTTCTCCTCTCGCTTCGGCCACCGCCGCGCCACCACCTTCCACCGTCAACATCCCCACCCTCACTGTCACACGGTTATGGAACAAAGAAGTGAATGGAAAACTCAATGGGAGTCACAACTCTATGGGCTGAAGAGAAGAAGCAAAATAAAAAATAGTGGAGTCAATGATTCTTGGGCAGCAAAAATGCGAAATATTAATAATAACGTTTTTGTCGAGGAAGAAACTATTTTCACTCCTCCTGTTTAA 723 0.4979 MHTNSQPEIKMRCCALPSSYHHHRLTSPPKTIFQFPSNTTTRYYSPKPDIITNPTRPALRLSLRANASTSSFDALAVATEEANASLYEVLGVPEWVAVAELKQAYKKLARKFHPDVSPPGRVEEYTRRFIRVQQAYETLSDPAMRELYDRDMAMAVKFPFSSRFGHRRATTFHRQHPHPHCHTVMEQRSEWKTQWESQLYGLKRRSKIKNSGVNDSWAAKMRNINNNVFVEEETIFTPPV 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00182 240 ProSitePatterns Nt-dnaJ domain signature. 129 148 IPR018253 -
Adu04g00182 240 Gene3D DnaJ domain 70 162 IPR036869 -
Adu04g00182 240 SMART dnaj_3 84 144 IPR001623 -
Adu04g00182 240 Pfam DnaJ domain 86 149 IPR001623 -
Adu04g00182 240 ProSiteProfiles dnaJ domain profile. 85 152 IPR001623 -
Adu04g00182 240 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 28 224 - -
Adu04g00182 240 SUPERFAMILY Chaperone J-domain 83 164 IPR036869 -
Adu04g00182 240 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 28 224 - -
Adu04g00182 240 CDD DnaJ 87 141 IPR001623 -
Adu04g00182 240 PRINTS DnaJ domain signature 87 105 IPR001623 -
Adu04g00182 240 PRINTS DnaJ domain signature 105 120 IPR001623 -
Adu04g00182 240 PRINTS DnaJ domain signature 124 144 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00182 Adu-Chr4 2298781 2301668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00182 87 149 C2H2 Transcription Factor Family AT1G74250 40.909 2.81e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00182 - - ahf:112795692 491.115