Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00171 ATGCCGCAGAAATCAATGGCGAAGAAGACGGCGTACGAGAAGATAAGGGAGGAGTTGAAACTTGATGCAAAGCCAAAGATGAACTTGGCTTCCTTTGTGACCACGTCAATGGAGGAAGAATGTAACATACTCATGATGGAATCCTTCAACAAGAACTATGTTAACATGGACGAGTACCCTGCCACCACTCAACTTCACAATAGATGTGTGAACATGATAGCACGTTTGTTCAACGCCGAAATTGGAGAAAATGAGAACGCAATTGGAACAGGAACTGTTGGATCTTCAGAGGCCATAATGCTGGCGGGCCTTGCATTCAAGAAAAAATGGCAGAACAAGCTCAAGGCCCAAGGAAAGCCCTATCATAAGCCCAACATTGTCACTGGTGCCAATGTCCAGGTATGTTGGGAAAAATTTGCAATGTATTTCGATGTAGAGTTGAGAAAAGTGGATGTTGGAGAAGGGTATTATGTGATGGACCCTACTAAAGCCATTGAAATGGTTGATGAGAACACTATCTGTGTGGCTGCAATCTTGGGTTCAACTTATAATGGCGAATTTGAAGATGTCAAGTTGCTTAACGACCTCTTACTACAACAAAACAAGAAAAATGGATGGGATACACCGATTCATGTTGATGCAGCAAGTGGTGGGTTTGTTGCTCCATTTCTTTATCCAGAGCTAGAATGGGATTTCAGGCTTCCATTGGTGAAGAGCATAAATGTTAGTGGCCACAAGTATGGTCTTGTTTATGCAGGCATTGGTTGGGTTATTTGGAGAAGTAAAGAGGACTTGCCTCAAGAGCTTATCTTCAATATTAATTACCTTGGAGCAGACCAACCCACCTTTACCCTTAATTTTTCTAAAGGGTCTAGTCAGATTATTGCACAATATTATCAACTAGTTCACCTTGGCAGAGAGGGATACCAAAGAGTAATGGAAAAGTGCAAAGAAAATGCAATGGTGGTGAAACAAGGATTGGAGAAAACAGGGTGCTTTAACATACTCTCAAAGGACAATGGTGTTCCTCTGGTAGCCTTTTCTCTTAAGGACACAAGTCACGGTGACGAGTTCAAGATATCGGAGATGCTACGCCGCCTCCACGGTTGGGTTGTGCCGGCTTATCCAATGCCATCCGGTGCGGAGCATGTCAATGTGCTCCGCGCGGTGGTTAGAGCCGAGTTTTCGCGCGAGATGGCCGAAAAACTCGTGCTCGACATAGAAAATGTGTTGCAAGAACTTGGGAAGCTTGGTCCCAAGTACACACCAAAAGTGACAAAAATTGCAAAGAGGAAAATCATTGTCCGAGAATCCAACAAGCATCACAAAGTCTTGGCAGCATAG 1344 0.4382 MPQKSMAKKTAYEKIREELKLDAKPKMNLASFVTTSMEEECNILMMESFNKNYVNMDEYPATTQLHNRCVNMIARLFNAEIGENENAIGTGTVGSSEAIMLAGLAFKKKWQNKLKAQGKPYHKPNIVTGANVQVCWEKFAMYFDVELRKVDVGEGYYVMDPTKAIEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLQQNKKNGWDTPIHVDAASGGFVAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPQELIFNINYLGADQPTFTLNFSKGSSQIIAQYYQLVHLGREGYQRVMEKCKENAMVVKQGLEKTGCFNILSKDNGVPLVAFSLKDTSHGDEFKISEMLRRLHGWVVPAYPMPSGAEHVNVLRAVVRAEFSREMAEKLVLDIENVLQELGKLGPKYTPKVTKIAKRKIIVRESNKHHKVLAA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00171 447 Gene3D - 35 329 IPR015421 GO:0003824
Adu04g00171 447 Pfam Pyridoxal-dependent decarboxylase conserved domain 2 350 IPR002129 GO:0016830|GO:0019752|GO:0030170
Adu04g00171 447 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 1 414 IPR010107 GO:0004351|GO:0006536|GO:0030170
Adu04g00171 447 Gene3D - 330 417 - -
Adu04g00171 447 SUPERFAMILY PLP-dependent transferases 1 414 IPR015424 -
Adu04g00171 447 PANTHER GLUTAMATE DECARBOXYLASE 1 440 - -
Adu04g00171 447 Gene3D - 1 34 - -
Adu04g00171 447 PANTHER GLUTAMATE DECARBOXYLASE 1 440 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00171 Adu-Chr4 2070298 2073681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00171 1 426 Calmodulin-binding Proteins AT5G17330 73.474 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00171 K01580 - gmx:100812201 722.235