Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00145 ATGGATAGCGAAGATCAAAGAATAACTCAAACTCAAGGAAATGAGAATCATGGAGTTCATGTATGTAACAAATGTGGATGGCCTTTTCCAAATCCACACCCCAGTGCCAAACATAGGCGTGCTCACAAGAAAAACTGTGGAACCATTGAAGGTTACAAGCTTTTGGTCTCAGAGGGTCAAACCCATTTGAACCCTTCAGACGATGAACACTTCTCTGATAATGATCACAAAACACAAGCTGCAGAAGAGAGTCCATCAATTTCCAAATCAAGAAATGATATTGTAGCACAAACTCCTAAAATTTTGCAAAGTGAGAGGAATGATGATTGTAACCTGCTGGAGTTACAAGATTTTAAAACTGATGATTCTTTTGCTCTCACAAGTGACTCAAATACCTGCAGATCTGAAGCCATGTCTGATGTGTTGCTGGACAATAAGATCTATGTTGATGGAACGAAGGGGACGACTTTGAAAGAAAAGGATGAAATCAAACCAGATAGAGACACGTTTGAGATTGTGGAATCTTCCGACAGCACCATAGGTAGAACATTTGAGGGAGTGTCTGGAGCAGTTACTGAAGTGGTTAGCTTGAAATCTCAAGTTACTGATGGAGCTTTTATTCTGAAGGAAAATAATGGCTCTGGCTTCCCTTCTGTTATGCCCAAAGAAGATCTTTTTCTTGAAGCAGAATCTGCTCAGAGCATGAATGATTCCATAGATGGCATACGGGTAGAGTCAGAACACATGACAGAGCTTGCTACTTCTGGTGACATCATGATATCACGGGAAAGGGAAGAAGTAAATGTTGATATGCTTACATTTCCTTCATGTGATGATAGACCTGATGTGGCACACCCTCATATTGAGTATGAATGTCATGAACCAGTGGTCTCTCAAAATTCTGCAAGTCTACATTTGTCTAAAGCATTGGAACAAGGGCATGATGGCTTGAAGGATTCTGTTACTAAGGAAAATGATTTTCTTATCAACCAAGGCCAACTGAGCAAAAAAGGAGATCGTCTCTCGCAAGATATGCATTCATTGAATAGTAACATGAAAAAGCAGGTGAACTGTGAGCTTATGGCTGCAGAAATGCATGCTGAAGAGTGCATTGAGGTTTTCAATGGTGAAAGTAACAGAAGATTACATGAAACTGGAGCCTTTATGAATGATATGAAAACTGAGAAGAATGAGAATCATGTGGTTCACTTTTCTGAAGAACAGGTATCCAATGATGGTCATAAAAATTCACAACAGATTGATGTACCCAAAGGTAGTTTAATGGCTGCATCAGATGAGAACGCCTGTGATGCATCCTTTGTATCTGCAACTAGTCAAACAACTGCTGTAATTATCAGGGACAATACAACTCATCATGAGGGAAACATAACCAGCATAGCTGTAGATGACGAATGCAGAAGGGCTAATATTGAAAATGATACTGGAATATGCATGAATACTCTTCAATCCAGTAATGTGCTTTCGGAGATCAATTCATCAAGTATATGTGGTGTTGAAATGGGTAAATTTGAGCAATCTGATATAATAGATGCACAACATGCTGAAAGTGGTATTGTGAAAGATGCTACATTACCAGATACTTTTGAATCTACAATTCTTTCAGAGGTTGTAATAGATGGGCCTAAAGGGACACCTGAAGATATTGAATGCTCAAATAGAAGTCCATTATCTTGTACTCACGAAAAAATCAAAGAAGAGGAAATCAATAGCATAGACAGATCAAATGAATACAGTAATATAGTTGCTAGTACTTCTGCTGCTCCTCATCAAACACAAGACGAGGAACTATTACTTAAGGCTACAGAAGGCATTGATTTAATCGAAGATTCCAATAGAACTGGTAGAGACCATTCTTTAAATATTGAGCCTTATCAATGTGTTTCTCCTGTCGAAGATACTCAAGATGGACAGCATGGCACGAAAGTTCCTGGAGTTGTTGCTGTCCCTATTCAAGATCGAAGAGATCTCCCTGTGCAATCTGATGTACAAGCTACTAATGAAGCGGAAGCTATAGCATCAACTGATTTGTCGATGTCAACAGAGACAGAAAAGTCCAACTTGAAGTACCCAGAGGCATCTGAGGAACAGCAGTATGAAAAATCCGAAATGTTTGAACCACCTTCTTTCATGACATTGGTCGAACCTGGACTCATGCTTGGCCCAAAATCTGCACCCGAAGTCGAGACAGATCCAAACAAGCAGAAACCGGATTCTAACTCTTCACAGGCTGCTTGGTTTCCCACTCTAACTCACAATGCCAATGAGTCTGAAGGGAGAAAGAGGAATGAAGAAATAATAGCCAAGGTAACAAGAAAGCAGAACACACCTCTCAAGAGTCTTTTGGTTGAGGCTGCTCATAACAGCAAAAAGTCAAAGTCGCCCAAATCAGAAAAAGATTCCGTGAATCAGAAACATGTTAGAGTCACAGAAGATAATGGTTCTGGATTGACTACTGTTAACTCCATTCTGGGTTGTGAATCTCCCGCAATGCAGATTATGAACCGAGAGAGTACGGAAGAATGGAACTCCTCGGATGACATAACAAGAAAAAAGAAGAAAGACAAGAGCAGATCACACTGGATACAATTGTTGTGTTGTTCATCTGTCGAAACTCGGTGA 2640 0.3992 MDSEDQRITQTQGNENHGVHVCNKCGWPFPNPHPSAKHRRAHKKNCGTIEGYKLLVSEGQTHLNPSDDEHFSDNDHKTQAAEESPSISKSRNDIVAQTPKILQSERNDDCNLLELQDFKTDDSFALTSDSNTCRSEAMSDVLLDNKIYVDGTKGTTLKEKDEIKPDRDTFEIVESSDSTIGRTFEGVSGAVTEVVSLKSQVTDGAFILKENNGSGFPSVMPKEDLFLEAESAQSMNDSIDGIRVESEHMTELATSGDIMISREREEVNVDMLTFPSCDDRPDVAHPHIEYECHEPVVSQNSASLHLSKALEQGHDGLKDSVTKENDFLINQGQLSKKGDRLSQDMHSLNSNMKKQVNCELMAAEMHAEECIEVFNGESNRRLHETGAFMNDMKTEKNENHVVHFSEEQVSNDGHKNSQQIDVPKGSLMAASDENACDASFVSATSQTTAVIIRDNTTHHEGNITSIAVDDECRRANIENDTGICMNTLQSSNVLSEINSSSICGVEMGKFEQSDIIDAQHAESGIVKDATLPDTFESTILSEVVIDGPKGTPEDIECSNRSPLSCTHEKIKEEEINSIDRSNEYSNIVASTSAAPHQTQDEELLLKATEGIDLIEDSNRTGRDHSLNIEPYQCVSPVEDTQDGQHGTKVPGVVAVPIQDRRDLPVQSDVQATNEAEAIASTDLSMSTETEKSNLKYPEASEEQQYEKSEMFEPPSFMTLVEPGLMLGPKSAPEVETDPNKQKPDSNSSQAAWFPTLTHNANESEGRKRNEEIIAKVTRKQNTPLKSLLVEAAHNSKKSKSPKSEKDSVNQKHVRVTEDNGSGLTTVNSILGCESPAMQIMNRESTEEWNSSDDITRKKKKDKSRSHWIQLLCCSSVETR 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00145 879 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Adu04g00145 879 MobiDBLite consensus disorder prediction 677 705 - -
Adu04g00145 879 MobiDBLite consensus disorder prediction 795 813 - -
Adu04g00145 879 MobiDBLite consensus disorder prediction 843 863 - -
Adu04g00145 879 MobiDBLite consensus disorder prediction 741 760 - -
Adu04g00145 879 MobiDBLite consensus disorder prediction 63 82 - -
Adu04g00145 879 MobiDBLite consensus disorder prediction 677 693 - -
Adu04g00145 879 MobiDBLite consensus disorder prediction 724 768 - -
Adu04g00145 879 MobiDBLite consensus disorder prediction 61 93 - -
Adu04g00145 879 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 84 876 - -
Adu04g00145 879 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 91 - -
Adu04g00145 879 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 91 - -
Adu04g00145 879 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 84 876 - -
Adu04g00145 879 MobiDBLite consensus disorder prediction 792 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00145 Adu-Chr4 1784560 1788636 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu04g00145 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00145 - - aip:107638253 1684.08