Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00121 ATGCCACCTGGTTTTGAGTACAACATCGATGATCTGTACCAGGAAGCTAAGAGAAGATGGCTGAAGCCGGTGGAAGTGCTATACATTTTGCGGAATCATGACCAGTGCAAGTTCACAAATATTCCCCCTCAAAAGCCAACAAGTGGATCCTTGTTTCTATTTAATAGAAGAATCATGCGTTTCTTCCGGAAAGACGGTTATAATTGGCGGAAGAAAAGGGATGGAAGAACTGTGGGAGAAGCACATGAACGGCTTAAGATTGGAAACGTTGAAATACTAAATTGTTACTATGCACATGGAGAGGAGAACCGTAGTTTCCAGAGGAGGAGCTACTGGATACTGGATCCGGCATATGAGCATATTGTTCTTGTGCATTACAGAGAAACAAAGGAGGGGAACTCAGGTTCTGGACCTATCCCACCATTGTCTGGAGGCTCCTCTCCTGAATTTAGTCAGAATCGAAGCTCACGTACTACGCTTGACCCAGGGACAATATCCGTGTTTGGTGATTCATGTGAACCTTCTCAGAATTTCTCCAGTCCTGAGTCTATGGAAGTTACCTCTAATATCATCAGAAACAATGGAATGGATCAGTTAGATGAAACAGATGCAGTCTTGCGCCAATTGAAGCAACAGTTAAGTTTGGAAAAGGAGAACTGTGAAGAAATTTCTCCCACATACAATGAGCCTGAGATTTTACATGATTTGAACCCTCAGCATGATGAAAGAGTGATGTACAAGCATAAATCTGCAGCTTTCACTGTGCCAAATGATTATGGACAAGCCGCTTATGAATGCAATGGAAGACAAGGTGACAATGGTAAAAATTATAATCAACTATTAAACTGCGATCACCCAGATGCAAATGAAAATGCCTTATCTTGGACAGAGGTGCTCGAGTCGTGTAAGCCTGCAAGCTTGACCAATTTACCAGAGCAACATGCATATGAGGCATATGGAAATGATAGCTCCCTACATTCTTCACGAGGTGTACTGATTGACAGTCAACAAAACAGTCGGTGGATAAACTCCAACAGTATTAATGCTGAAAACTCTGTCTTCTCTTGTCCTCAAGATGGTGGAACCAAATTTCCTCTGTATTCACCGGTTGAAGCTGAAAGTTCTGACTATGCGACATTGTTTCATCAAATCCAAATTCCACCACCTCTGGATGCAGATTCATGCCTGACTATTTCACAGAAACAAAAATTCACAATTAGGAGAATCTTCCCAGAGTGGTGTTATGCCACAGAGACTTCAAAGGTGGTCATTATTGGGTCATTTCTCTGTCTTCCCTCAAATTCTACCTGGGCTTGTATGTTTGGTGATATTGAAGTGCCTGCTGAGATAATTCAGGATGGTGTTATTTGTTGTGAAGCTCCCCCCCACCTTCCTGGAAAGGTTACTCTGTGCGTTACTTCTGGAAATCGGGAGTCCTGCAGTGAATTTCGAGAGTTTGAGTTTCGCAATAAGACTAATAATTGCACTCGTTGTAACTCAATGGAAACAGAAACTGCTAGAAGCCAAGACGAGCTGTTATTACTTGTTACATTTGCACAGATGCTCCTTTCTCCTCCAACTAAAAAGAATGACAACATGGAACCTGTATATCATCTTCCAGTGGAACAGAAAGCAGATGATGATTCATGGAGCCATGTGATAGAGGCTCTTCTAGTAGGCAGTGGAACTTCATCAGGTACTATTGATTGGCTTCTTGAAGAGCTGCTGAAGGATAGGCTACAGCTGTGGCTTTCTGGCAAATCCTGGGAAATAGATGAAGCAACCGGCTGCCCTTTGTCCAAGAAAGAGCAGGGGATTATACACATGGTTGCTGGATTGGGTTATGAGTGGGCCTTGATCCCTATTCTCAGTTGTGGTGTGAATATAAATTTTCGTGACATCAGGGGGTGGACTGCCCTTCATTGGGCTGCACGGTTTGGAAGGGAAAAAATGGTTGCTTCACTTATTGCTGCTGGTGCATATGCTGGAGCAGTAACTGATCCAACATCTGCAGACCCAGATGGGAAAACTGCTGCAGCTATTGCTGCCAGCAATGGCCACAAGGGACTGGCCGGTTATCTTTCAGAAGCTGCATTTCGTGCTCATTCTTTCAAAAAACGGAGGGAGAGGGAAGCTGCTGCAGCAGCCGCTGCCGCTGCTGCTGGTCTAGATGGGTATGATATCGATGCTGATGGCATTGGTAACATTCTAGAGCTTTCTCCCAGGTTAAGTCATAGCTTTGGGAGGCTTCGTGATTACAATGCAGCTGCTTTATCAATTCAGAAGAAATATCGAGGTTGGAAAGGTCGCAAAGATTTCTTAGCACTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAGGTTCGGAAGCAATACAAGATAATAGTATGGGCAGTTGGAGTCTTGGAGAAGGTAGTGCTACGATGGCGGAGAAAAGGAGCTGGTCTACGAGGTTACCGACAAGACTCAATTGATGAAAATGACGATGATGATTTTCTCAAGGTGTTCAGGAAGCAGAAAGTGCATGTAGCAATTGAAAAAGCTTTTTCACGGGTGCTGTCCATGGTACACTCTAGTGGTGCCCGTCAACAATATCGCCGCATGCTTGAGATGTATCGTGAAGCTAAGGCTGAACTTGGTAGCATGAATGATGAAGCGCCATTAGCGACGTCTGTAGGGGACACATCAAATATAGATGATGATGATGAACTCTTTCAAATTCCTGGGGGCTGGGAGACACTCTAG 2757 0.4414 MPPGFEYNIDDLYQEAKRRWLKPVEVLYILRNHDQCKFTNIPPQKPTSGSLFLFNRRIMRFFRKDGYNWRKKRDGRTVGEAHERLKIGNVEILNCYYAHGEENRSFQRRSYWILDPAYEHIVLVHYRETKEGNSGSGPIPPLSGGSSPEFSQNRSSRTTLDPGTISVFGDSCEPSQNFSSPESMEVTSNIIRNNGMDQLDETDAVLRQLKQQLSLEKENCEEISPTYNEPEILHDLNPQHDERVMYKHKSAAFTVPNDYGQAAYECNGRQGDNGKNYNQLLNCDHPDANENALSWTEVLESCKPASLTNLPEQHAYEAYGNDSSLHSSRGVLIDSQQNSRWINSNSINAENSVFSCPQDGGTKFPLYSPVEAESSDYATLFHQIQIPPPLDADSCLTISQKQKFTIRRIFPEWCYATETSKVVIIGSFLCLPSNSTWACMFGDIEVPAEIIQDGVICCEAPPHLPGKVTLCVTSGNRESCSEFREFEFRNKTNNCTRCNSMETETARSQDELLLLVTFAQMLLSPPTKKNDNMEPVYHLPVEQKADDDSWSHVIEALLVGSGTSSGTIDWLLEELLKDRLQLWLSGKSWEIDEATGCPLSKKEQGIIHMVAGLGYEWALIPILSCGVNINFRDIRGWTALHWAARFGREKMVASLIAAGAYAGAVTDPTSADPDGKTAAAIAASNGHKGLAGYLSEAAFRAHSFKKRREREAAAAAAAAAAGLDGYDIDADGIGNILELSPRLSHSFGRLRDYNAAALSIQKKYRGWKGRKDFLALRQKVVKIQAHVRGYQVRKQYKIIVWAVGVLEKVVLRWRRKGAGLRGYRQDSIDENDDDDFLKVFRKQKVHVAIEKAFSRVLSMVHSSGARQQYRRMLEMYREAKAELGSMNDEAPLATSVGDTSNIDDDDELFQIPGGWETL 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00121 918 ProSiteProfiles Ankyrin repeat region circular profile. 635 660 - -
Adu04g00121 918 Pfam Ankyrin repeats (3 copies) 612 696 IPR002110 GO:0005515
Adu04g00121 918 Pfam IQ calmodulin-binding motif 778 797 IPR000048 GO:0005515
Adu04g00121 918 Pfam IQ calmodulin-binding motif 755 773 IPR000048 GO:0005515
Adu04g00121 918 Coils Coil 199 219 - -
Adu04g00121 918 MobiDBLite consensus disorder prediction 139 182 - -
Adu04g00121 918 CDD IPT 405 489 - -
Adu04g00121 918 Gene3D - 753 800 - -
Adu04g00121 918 SMART CG_1_2 12 130 IPR005559 GO:0003677
Adu04g00121 918 Gene3D Immunoglobulins 399 490 IPR013783 -
Adu04g00121 918 ProSiteProfiles IQ motif profile. 753 782 IPR000048 GO:0005515
Adu04g00121 918 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Adu04g00121 918 Coils Coil 869 889 - -
Adu04g00121 918 Pfam IPT/TIG domain 405 479 IPR002909 -
Adu04g00121 918 MobiDBLite consensus disorder prediction 130 182 - -
Adu04g00121 918 Gene3D - 491 698 IPR036770 -
Adu04g00121 918 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 697 910 - -
Adu04g00121 918 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 696 - -
Adu04g00121 918 PANTHER CALMODULIN-BINDING PROTEIN 697 910 - -
Adu04g00121 918 PANTHER CALMODULIN-BINDING PROTEIN 1 696 - -
Adu04g00121 918 ProSiteProfiles IQ motif profile. 776 800 IPR000048 GO:0005515
Adu04g00121 918 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Adu04g00121 918 SUPERFAMILY E set domains 405 489 IPR014756 -
Adu04g00121 918 SMART ANK_2a 635 667 IPR002110 GO:0005515
Adu04g00121 918 SMART ANK_2a 674 703 IPR002110 GO:0005515
Adu04g00121 918 ProSiteProfiles Ankyrin repeat profile. 635 667 IPR002110 GO:0005515
Adu04g00121 918 SUPERFAMILY Ankyrin repeat 606 697 IPR036770 -
Adu04g00121 918 SMART iq_5 775 797 IPR000048 GO:0005515
Adu04g00121 918 SMART iq_5 752 774 IPR000048 GO:0005515
Adu04g00121 918 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 749 804 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00121 Adu-Chr4 1448538 1456323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00121 5 911 CAMTA Transcription Factor Family AT1G67310 43.042 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Adu04g00121 CG-1 5.2e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00121 K21596 - gmx:100786880 1083.17