Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00119 ATGAGTTTGCTCCATGTTGTTGGGTTTGGTCTAAAAGTAGGGCATCTACTTTGGGTGCCATGTTGCTTGATTGTGTCTTTCATTTACCTCAACTGGTTCAATTGCAATCTTGGAATTAATCATAACCATAATTGTAGTAACAATAACAAGTGGAAGATGGGTTTTCTTGGAGATTATGATGGAAAGGTTTGGCTCAATAATTGGTGGGAGAAGAACTTAGGGAACACTTGTAAACAATACTATTACAAGTATAACAGTTTGAGGAGATCCTGGTGGAGGAAGCTCTGGCATGCTTATGTGGTTTTTTGGATTGTGATTTCGTCCTCGAGGTTCTTGCATATGAGCTCAGAGGCTACTGAGAAGAGGAAGGAAAGTCTGGTTAGCTTGTGTGATGAAAGGGCAAGGATGCTGCAGGATCAGTTTAATGTTAGTATGAACCATATTCAGGCTATGTCCATTTTGATCTCCACTTTTCACCATGCCATGGACCCTTCTGCGATCGATCAGAAAACTTTTGCCAGGTATACGGAAAGAACCGCGTTCGAGAGGCCCCTTACAAGTGGTGTTGCATATGCTGTAAGGGTGCTCCATTCCGAAAGGGAACAATTCGAGAAGCAGCAAGGGTGGACTATTAAGAGGATGGATACCCTGGAACAAAACCCGGTTCAAGAGGATGATTTCGCCTTAGAGGCATTGGAGCCATCCCCTATTCAGGAAGAATATGCTCCTGTCATCTTTGCCCAGGAAACAATCAAACATGTAATTTCTGTTGATGTGCTTTCTGGAAAGGAAGACCGGGAAAACGTGTTGCGTGCAAGAGAGTCGGGCAAAGGAGTCTTAACTGCTCCCTTCAGGCTGCTCAAAACAAATCGTCTAGGCGTTATCCTCACATTTGCTGTATACAAGAAAGAACTTCCATCAAATGCAACCCCAGATGAAAGGATTCAAGCAACTGATGGGTATCTTGGAGGGGTCTTTGACATTGAGTCATTAGTGGAAAAATTACTTCAGCAACTTGCTAGCAAGCAGTCAGTCATTGTTAATGTTTACGATACCACAAATCATACCCATCCTATCGCCATGTATGGTTCAGATGTATTAGGTGATGAATTCTACCATGTCAGCACTCTCAACTTTGGAGATCCCTTCAGGAAGCATGAGATGCACTGCAGGTTCAAACAGAAACCACCGTGGCCGTGGGAGGCAATACATTCATCAGTTGGCATGCTTGTTATTGCAGTCCTTATTGGATATATTCTCTATGCCACTGTGAATCGAATGTTCATTTCCGAGGATAATTACAATGAGCAGATGGAGCTTAAAAAACGTGCCCAGGCAGCTGATGTTGCAAAATCTCAGTTTCTCGCCACTGTTTCCCATGAGATCCGAACACCAATGAATGGTGTCTTAGGGATGTTGAATATGCTTATGGACACAGATCTGGATGTAACACAACAGGAGTATGTCAGAACAGCACAGGGTAGTGGAAAAGCTCTTGTATCCCTTATAAATGAGGTTTTGGACCAGGCAAAGATTGATTCCGGTAAGCTAGAGCTGGAGGCAGTGGTGTTTGACTTACGGGCGATTTTGGATGATGTGTTGTTACTATTTTCTGAGAAGTCTCAAGGGAAAGGAGTAGAGTTGGCAGTATATGTCTCGGATGAGGTTCCAGAACAACTCATAGGTGATCCTGGAAGGTTTAGACAAATAATTACAAATCTCATGGGCAACTCTATTAAGTTCACGGAAAAAGGACATATCTTTGTTACCATCCATCTTGTTGAGGAGGTTGTTCATTCAATAGAAGTTGAGCCGCAATCAACCTCAAAAGATACCTTAAGTGGTTACCCGGTTGCTGATATTCGTCGGAGCTGGGAAGGATTCAAGGCTTTCAGCCAAGAGGGACCTCTTGGTTCTTTTTCGTCCCCCTCGAGCGAGCTTGTCAATCTGATTGTATCTGTTGAGGATACTGGAGTAGGTATTCCTCTCGAGGCACAGTCCCGTATATTCACTCCTTTCATGCAAGTAGATCCATCCATCTCCCGAAAACATGGGGGAACCGGGATTGGTCTAAGCATTAGTAAGTGTTTGGTTGGACGTATGAATGGAGAAATTGGGTTTGTGAGCATACCCAACATAGGTTCCACTTTCACATTTACTGCTGTCTTCACAAATGGATCTCCCAATTCAAAGGAGGGTAGAAGTCAGCAAATCAACAACCAGCCTCATCTTGCCTCCTCGGAATTCCATGGCACGAATGCCTTAGTTATCGACCCCAGACCCATTCGAGCTAAAGTGTCAAGATATCACCTCCAACGTCTTGACATTCGTGTCGAATTAGTCTCAGATTTGGATCAAGGTTTGTCCCTCATAACCAATGGGAATTCAGCAATTAGTATTGTTTTTATTGAGCAGGAGGTCTGGGATAGAGATTCGAGCATTTCGTCGCACTTCGTCAACAATACTAGAAAAGTTGACCCTCCGAAGCTATTCATACTTGTTAATTCCAATAGTTCTTTTAGAGCAAGTTCTGTAAATTCTGGTGATCCTTTTCCAGTTGTCATCACAAAACCTCTAAAAGCAAGTATGCTAGCTGTGACATTGCAAAGAGCCATGGGTGTTGGGAACAGAGGGAACACTCGAAATGTGGAGCTCCCCAGTTTATCTCTCCAACATCTTCTTCGAGGGAGAAGGATTTTAGTAGTAGACGACAACAGTGTGAACCGCACCGTGGCAGCCGGTGCCTTGAAAAAATATGGAGCTGATGTTGTTTGTGTAAGCAGTGGAAAAGATGCCATCTCCAAGCTGAAGCCACCCCATCAATTCGATGCCTGTTTCATGGATATCCAAATGCCAGAAATGGATGGCTTTGAAGCTACAAGACGAATTCGAGAGCTGGAGCACATGGCAAGCATCGAAGCATCGATGGACGGTGATGGTAATAATTCCAAGTTGCGTGTTCCCATTTTGGCTATGACAGCGGACGTGATGCAGGCAACAAATGAGGAATGCCTAAAAAGTGGGATGGATGGATATGTTTCAAAACCCTTTGAAGCTGAACAACTTTATAGAGAAGTTTCACGGTTTTTCCCAACTTCATGA 3102 0.4368 MSLLHVVGFGLKVGHLLWVPCCLIVSFIYLNWFNCNLGINHNHNCSNNNKWKMGFLGDYDGKVWLNNWWEKNLGNTCKQYYYKYNSLRRSWWRKLWHAYVVFWIVISSSRFLHMSSEATEKRKESLVSLCDERARMLQDQFNVSMNHIQAMSILISTFHHAMDPSAIDQKTFARYTERTAFERPLTSGVAYAVRVLHSEREQFEKQQGWTIKRMDTLEQNPVQEDDFALEALEPSPIQEEYAPVIFAQETIKHVISVDVLSGKEDRENVLRARESGKGVLTAPFRLLKTNRLGVILTFAVYKKELPSNATPDERIQATDGYLGGVFDIESLVEKLLQQLASKQSVIVNVYDTTNHTHPIAMYGSDVLGDEFYHVSTLNFGDPFRKHEMHCRFKQKPPWPWEAIHSSVGMLVIAVLIGYILYATVNRMFISEDNYNEQMELKKRAQAADVAKSQFLATVSHEIRTPMNGVLGMLNMLMDTDLDVTQQEYVRTAQGSGKALVSLINEVLDQAKIDSGKLELEAVVFDLRAILDDVLLLFSEKSQGKGVELAVYVSDEVPEQLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTIHLVEEVVHSIEVEPQSTSKDTLSGYPVADIRRSWEGFKAFSQEGPLGSFSSPSSELVNLIVSVEDTGVGIPLEAQSRIFTPFMQVDPSISRKHGGTGIGLSISKCLVGRMNGEIGFVSIPNIGSTFTFTAVFTNGSPNSKEGRSQQINNQPHLASSEFHGTNALVIDPRPIRAKVSRYHLQRLDIRVELVSDLDQGLSLITNGNSAISIVFIEQEVWDRDSSISSHFVNNTRKVDPPKLFILVNSNSSFRASSVNSGDPFPVVITKPLKASMLAVTLQRAMGVGNRGNTRNVELPSLSLQHLLRGRRILVVDDNSVNRTVAAGALKKYGADVVCVSSGKDAISKLKPPHQFDACFMDIQMPEMDGFEATRRIRELEHMASIEASMDGDGNNSKLRVPILAMTADVMQATNEECLKSGMDGYVSKPFEAEQLYREVSRFFPTS 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00119 1033 ProSiteProfiles Histidine kinase domain profile. 457 725 IPR005467 -
Adu04g00119 1033 ProSiteProfiles Response regulatory domain profile. 898 1030 IPR001789 GO:0000160
Adu04g00119 1033 Gene3D - 514 725 IPR036890 -
Adu04g00119 1033 CDD HATPase_EvgS-ArcB-TorS-like 567 723 - -
Adu04g00119 1033 ProSiteProfiles CHASE domain profile. 163 389 IPR006189 -
Adu04g00119 1033 Pfam Response regulator receiver domain 899 1025 IPR001789 GO:0000160
Adu04g00119 1033 CDD HisKA 450 511 IPR003661 GO:0000155|GO:0007165
Adu04g00119 1033 PRINTS Bacterial sensor protein C-terminal signature 650 664 IPR004358 GO:0016310|GO:0016772
Adu04g00119 1033 PRINTS Bacterial sensor protein C-terminal signature 668 678 IPR004358 GO:0016310|GO:0016772
Adu04g00119 1033 PRINTS Bacterial sensor protein C-terminal signature 685 703 IPR004358 GO:0016310|GO:0016772
Adu04g00119 1033 PRINTS Bacterial sensor protein C-terminal signature 709 722 IPR004358 GO:0016310|GO:0016772
Adu04g00119 1033 SUPERFAMILY CheY-like 749 873 IPR011006 -
Adu04g00119 1033 Gene3D - 426 513 - -
Adu04g00119 1033 SMART REC_2 897 1026 IPR001789 GO:0000160
Adu04g00119 1033 SUPERFAMILY CheY-like 894 1029 IPR011006 -
Adu04g00119 1033 SMART HKATPase_4 562 725 IPR003594 -
Adu04g00119 1033 CDD PRTases_typeI 846 926 IPR000836 -
Adu04g00119 1033 Gene3D - 114 166 - -
Adu04g00119 1033 Gene3D - 881 1029 - -
Adu04g00119 1033 PANTHER HISTIDINE KINASE 3 71 1031 - -
Adu04g00119 1033 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 438 516 IPR036097 GO:0000155|GO:0007165
Adu04g00119 1033 Gene3D CHASE domain 167 396 IPR042240 -
Adu04g00119 1033 Pfam His Kinase A (phospho-acceptor) domain 450 515 IPR003661 GO:0000155|GO:0007165
Adu04g00119 1033 CDD REC_hyHK_CKI1_RcsC-like 899 1026 - -
Adu04g00119 1033 Pfam CHASE domain 166 362 IPR006189 -
Adu04g00119 1033 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 504 720 IPR036890 -
Adu04g00119 1033 PANTHER TWO-COMPONENT HISTIDINE KINASE 71 1031 - -
Adu04g00119 1033 SMART HisKA_10 450 515 IPR003661 GO:0000155|GO:0007165
Adu04g00119 1033 ProSiteProfiles Response regulatory domain profile. 753 872 IPR001789 GO:0000160
Adu04g00119 1033 SMART CHASE_2 163 364 IPR006189 -
Adu04g00119 1033 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 723 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00119 Adu-Chr4 1427952 1434329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00119 1 1030 Miscellaneous Gene Families AT1G27320 64.991 0.0 1330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu04g00119 CHASE 4.6e-37 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00119 K14489 - gmx:100801546 1573.53