LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu04g00111	ATGTCTACCGCCACATCCAGCTCTTGGGGTACTGCGCTCGTTAATATCTCTCCTTACACCTTCTCCGCCATCGGCATCGCCGTCTCCATCGGTGTCTCAGTTCTCGGTGCTGCTTGGGGGATTTACATAACTGGTAGCAGCTTGATCGGTGCTGCAATCAAGGCTCCCCGAATCACTTCCAAGAATCTCATTAGTGTAATCTTCTGTGAAGCTGTTGCTATTTATGGTGTTATTGTGGCCATCATTCTACAAACAAAATTAGAAAGCGTTCCTTCATCACAGATCTATGCAGCCGAGTCTCTTAGGGCTGGATATGCAATCTTTGCTTCTGGACTTATTGTTGGCTTCGCAAATCTTGTTTGTGGattgtgtgtaggAATAATTGGAAGCAGTTGTGCGTTGTCTGATGCTCAAAACTCCTCTCTCTTTGTGAAGATTCTTGTGATTGAAATTTTTGGTAGTGCTCTTGGGCTATTTGGAGTTATTGTTGGAATCATCATGTCAGCTCAAGCAACATGGCCAACAAAGGTTTAA	534	0.4345	MSTATSSSWGTALVNISPYTFSAIGIAVSIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSQIYAAESLRAGYAIFASGLIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTKV	177

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu04g00111	177	Gene3D	-	19	174	IPR035921	-
	Adu04g00111	177	SUPERFAMILY	F1F0 ATP synthase subunit C	17	86	IPR035921	-
	Adu04g00111	177	CDD	ATP-synt_Vo_c_ATP6F_rpt1	21	83	-	-
	Adu04g00111	177	PANTHER	V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT	4	175	-	-
	Adu04g00111	177	Pfam	ATP synthase subunit C	108	167	IPR002379	GO:0015078\|GO:0033177\|GO:1902600
	Adu04g00111	177	Pfam	ATP synthase subunit C	24	83	IPR002379	GO:0015078\|GO:0033177\|GO:1902600
	Adu04g00111	177	PANTHER	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	4	175	-	-
	Adu04g00111	177	CDD	ATP-synt_Vo_c_ATP6F_rpt2	103	167	-	-
	Adu04g00111	177	PRINTS	Vacuolar ATP synthase 16kDa subunit signature	37	61	IPR000245	GO:0033179\|GO:0046961\|GO:1902600
	Adu04g00111	177	PRINTS	Vacuolar ATP synthase 16kDa subunit signature	63	87	IPR000245	GO:0033179\|GO:0046961\|GO:1902600

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu04g00111	Adu-Chr4	1300143	1302729	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu04g00111	6	176	Primary Pumps ATPases(2)	AT2G25610	94.152	5.88e-111	313

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu04g00111	K03661		-	gmx:100778175	310.071

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