Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00108 ATGGAACCCAGACATAGGTTTGTATCTGTGCTCTTGCAGTTGTTGCTGCTGGGTTGCGTTCTTTACGGCGCGGAATCTCAGTGCAGCAAGGGCTGTCCCCTAGCTCTAGCTTCCTACTACATGTGGACAGGCTCCAACTTGACGTACGTTTCAGAGATCATGAAATCCAACGTCCTCTCGGACCCAAACGACATAGTCAACTACAACAAAGACACGATTCCCAACAAGGACAGTGTTCAAGCCTCCATAAGAGTCAACGTTCCGTTCCCATGCGACTGCATCAACGGCGAGTTTCTAGGTCACACTTTCCAGTACGATATTCAGAGCGGGGACACGTACGAGCATGTGGCGACTAACAATTACGCCAATTTGACGAACGTGAATTGGCTGAGGAAGTTCAACAGTTATCCTCCTAACAACATCCCTGACACTGGAACCCTTAACGTTACCGTTAACTGCTCCTGTGGGAACAGACAAGTGGCGAATTATGGTTTGTTCATCACGTATCCACTTAGGCCTGGGGACACCTTACAGGCTGTGGCAAAGAATCAGAGTGTTGACGCTTTCTTGCTTCAGAAGTACAATCCCTCTGTCAATTTCAACCAAGGCTCTGGCCTTGTTTATATTCCAGGCAAAGGTAACCCTTTCTCAAATACCCTTTTTGCAGGTCTTGCTGCTGGGGCTATTGCCGGCATAGCCATTGGTATAGTAGCTGGTCTTCTATTAGTGGCTGTTGGTATATATTTTGGATATTTCAGGAAAAAAAAGATGCAGAGGGAAGAATTGCTCTCACAAGACTCCAAACCAATGTTCAGACAAGATGGTAAAGATGAAACCTCGCGTAGTGCTGCTTATGAAGCTGCAGGGCCTGCTGGGCCTGGTACCATCACAGGCATAACAGTGGACAAATCAGTCGAGTTTTCATATGAAGAATTAGCAACTGCCACGAATAACTTCAATTTGGCTAATAAAATTGGTCAAGGTGGTTTTGGTGCTGTCTACTATGCAGAGCTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCAGAATTGAAAGTCCTGACACGTGTTCATCATCTAAACCTGGTGCGGTTGATTGGATATAGTATCGAGGGTTCGCTTTTCCTTGTCTATGAGTACATTGAGAATGGAAACTTGAGTCAGCATCTCCGCGGTTCTGGAAGAGAGCCATTGCCATGGGCTACCCGTGTTCAAATTGCATTGGATTCTGCCAGAGGTCTTGAATATATTCATGAGCATACAGTGCCTGTATATATTCATCGCGACATAAAGTCAGCAAATATATTAATAGATAAAAACTACCGCGGAAAGGTTGCCGATTTCGGATTGACTAAACTGACGGAAGTTGGAAGCTCATCACTTCCTACTGGTCGTCTTGTCGGAACTTTTGGATACATGCCTCCAGAGTATGCTCAATATGGAGATGTATCACCCAAAGTAGATGTGTATGCTTTTGGAGTAGTTCTTTTTGAACTTATTTCAGCTAAGGAAGCTATCGTCAAGACAAGCGAATCTGTTGCTGACTCAAAGGGCCTTGTGGCTTTGTTTGAAGGAGTTCTTAGTCAGCCTGATCCTACAGAAGATCTTTGTAAACTAGTGGATCCAAGGCTTGGGGAAAACTACCCTATTGATTCAGTTCGCAAAATGGCGCATCTAGCGAAAGCTTGTACACAGGACAATCCCCAACTGCGTCCGAGTATGAGATCCATTGTTGTTGCCTTAATGACACTTTCTTCAACTACTGATGATTGGGATGTTGGCTCCTTCTATGAAAACCAAAATCTTGTGAATCTCATGTCCGGAAGATAG 1857 0.4475 MEPRHRFVSVLLQLLLLGCVLYGAESQCSKGCPLALASYYMWTGSNLTYVSEIMKSNVLSDPNDIVNYNKDTIPNKDSVQASIRVNVPFPCDCINGEFLGHTFQYDIQSGDTYEHVATNNYANLTNVNWLRKFNSYPPNNIPDTGTLNVTVNCSCGNRQVANYGLFITYPLRPGDTLQAVAKNQSVDAFLLQKYNPSVNFNQGSGLVYIPGKGNPFSNTLFAGLAAGAIAGIAIGIVAGLLLVAVGIYFGYFRKKKMQREELLSQDSKPMFRQDGKDETSRSAAYEAAGPAGPGTITGITVDKSVEFSYEELATATNNFNLANKIGQGGFGAVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNLSQHLRGSGREPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNYRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLFELISAKEAIVKTSESVADSKGLVALFEGVLSQPDPTEDLCKLVDPRLGENYPIDSVRKMAHLAKACTQDNPQLRPSMRSIVVALMTLSSTTDDWDVGSFYENQNLVNLMSGR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00108 618 ProSiteProfiles Protein kinase domain profile. 319 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00108 618 SUPERFAMILY Protein kinase-like (PK-like) 300 590 IPR011009 -
Adu04g00108 618 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 11 618 IPR044812 GO:0019199|GO:0045087
Adu04g00108 618 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Adu04g00108 618 Gene3D Phosphorylase Kinase; domain 1 304 389 - -
Adu04g00108 618 Gene3D Transferase(Phosphotransferase) domain 1 390 609 - -
Adu04g00108 618 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 11 618 - -
Adu04g00108 618 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Adu04g00108 618 SMART serkin_6 319 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00108 618 Pfam Protein tyrosine and serine/threonine kinase 320 589 IPR001245 GO:0004672|GO:0006468
Adu04g00108 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00108 Adu-Chr4 1257395 1265813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00108 8 618 Receptor kinase-like Gene Family AT3G21630 58.880 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Adu04g00108 PK_Tyr_Ser-Thr 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00108 - K13429 gmx:100777781 942.954