Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00094 ATGGCGTCGTTCTTCTCGAAGCTGGCGTTGATTCTCTCGTTCTTTCTGCTTTTCTTCCTCTTTCCTGCTCAATCCGCGGTGTTCAGCGTAGATCTGGGGTCCGAATCGCTCAAAGTTGCTGTCGTGAACTTGAAACCTGGTCAGACACCGATCTCTATCGCCATCAACGAGATGTCGAAGCGCAAATCACCGGCGCTGGTTTCCTTCAACTCCGGCAACCGTCTCCTTGCCGAAGAAGCCGCAGGCCTCACCGCTCGCTATCCGCAGGACGTGTACTCTCAAATCAGGGACCTCATAGGGAAACCCTACGGCTTCGCCAAGAAGTTTCTGGATTCAATGTACCTCCCTTTCGAGGTGAAGGAGGATTCCAGAGGCACAGTGAGCTTCGTGGTGGAAGGCGATGGTGGCGCCACTCAGTATTCCGCGGAGGAATTGGTGGCTATGGTGCTGGGCTATGCGGTGCATTTGGCGGAGTTCCACTCCAAGGTTCCGATCAAAGACGCCGTGATATCGGTGCCGCCTTATTTCGGGCAGGCTGAGAGGAAAGGGGTGCTTCAGGCGGCTCAGTTGGCGGGGATTAATGTTCTCTCGCTGATAAATGAGCATTCTGGCGCTGCGTTGCAGTATGGAATTGACAAAGACTTTTCCAATGAGTCCAGGCATGTTGTTTTTTATGACATGGGTTCTGGCAGTACCTATGCTGCACTTGTGTATTTCTCAGCGTACAAGAGCAAAGAGTATGGGAAGACTGTGTCTGTGAACCAGTTTCAGGTTAAGGACGTACGCTGGAACGCAGAGCTGGGTGGCCAGAATATGGAACTACGGTTGGTGGAGCATTTTGCAGATGAGTTCAATAAACAAGTTGGTGGTGGAATAGATGTGAGGAAATTTCCCAAGGCTATGGCAAAATTGAAGAAGCAGGTTAAGCGAACAAAAGAAATTCTTAGTGCAAACACAGCAGCTCCTATTTCAGTTGAATCACTTCATAATGATATAGACTTCAGGAGCTCAATAACCCGTGAGAAGTTTGAAGAGCTTTGTGATGATATTTGGGAACAATCTCTTCTGCCAGTGAAAGAGGTGATTGAGCATTCTGGCTTGTCAATGGACCAGATATATGCGGTGGAGTTGATTGGAGGTGCTACCAGAGTGCCAAAGCTACAGGCTAAGCTTCAAGAGTTCCTTGGGAGAAAACAACTTGATAGGCATCTTGATGCTGATGAAGCTATTGTTCTTGGTGCAGCGTTGCACGCTGCAAATTTAAGTGATGGAATTAAATTGAACCGCAAGCTAGGAATGATTGATGGTTCTTTGTATGGATTTGTGGTTGAGTTGGATGGTCCTGATCTTCTGAAGGATGAAAGCTCGAGGCAGTTACTAGTACCACGAATGAAGAAACTACCGAGCAAGATGTTCAGATCCGTTAGTCACAACAAGGATTTTGAAGTGTTGCTAGCTTATGAAAGTGAAAATCATTTACCACCGGGTGTCACTTCTCCTGAAATTGCAAAATACCAGATTTCTGGTTTGACAGATGCAAGTGAGAAATACTCATCTCGAAACCTGTCGTCCCCTATCAAGGCAATTATACATTTCTCTCTAAGCAGAAGTGGAATTCTCTCTCTTGATCGGGCTGATGCTGTTATCGAAATAACAGAATGGGTGGAAAAAGCAGTGAAAAAATGGAAACTGATAGTGGGGGTAATACAAAAGCTTAAAAAGAAGACCTTTAGGGTACCATTAAAGATCGTTGAGAAAGAGCCTGGATTGTCTCTGTCTAAAGATTTTCTTGCCGAAGCCAAAGGAAAATTGGAAGCACTAGACAAAAAGGATGCCGAAAGAAAAAGAACGGCTGAGTTAAAAAATAATTTAGAAGGTTATATATATACCACTAAGGAAAAGATTGAAACTGTTGAAGAGTTTGAAAAAGTTTCTACAAGTGAGGAACGCCAGTCCTTTGTTGAGAAGCTTGATGAGGTGCAAGATTGGTTGTACACAGATGGTGAAGATGCCAATGCTACTGAGTTTCAAGAACGTCTAGATATGTTGAAAGCTGTTGGTGATCCAGTTTTCTTTAGGTTAAAAGAGCTTACAGCTCGACCAGCTGCTATTGAACATGCCCAGAAATATCTCGAGGAGCTGAAGCAGATTGTTCAAGAGTGGAAGGTAAACAAGTCTTGGCTTCCAAAAGAACGAGTAGATGCGATTCTAGATGATGCTGAAAAGTTAAAGAAGTGGTTGGACGAAAAAGAGACTGAACAACAGAAGATTTCTGGATTCAGTACACCAGCTTTTACTTCTGAAGAAGTACTTTTGAAGGTGTTTGATCTTCAAAACAAGGTTGCCAGTGTTAATAAAATTCCCAAGCCTAAGCCTAAAATTCAGAAACCTGTGAAGAATGAAACTGAGAGCAAAGTGCAGGAGGATTCGGGTAATTCTAACTCCACCTCAACTGCCGGTGATCAATCCGGTGACAGTTCAGAAGGCACAAGTGAAGAATTTGCTGACAATCAAGAAGGTCCAAGTGATGAAAAGAATGATGAGCAAACAGAAGTTCATGATGAGTTATGA 2571 0.443 MASFFSKLALILSFFLLFFLFPAQSAVFSVDLGSESLKVAVVNLKPGQTPISIAINEMSKRKSPALVSFNSGNRLLAEEAAGLTARYPQDVYSQIRDLIGKPYGFAKKFLDSMYLPFEVKEDSRGTVSFVVEGDGGATQYSAEELVAMVLGYAVHLAEFHSKVPIKDAVISVPPYFGQAERKGVLQAAQLAGINVLSLINEHSGAALQYGIDKDFSNESRHVVFYDMGSGSTYAALVYFSAYKSKEYGKTVSVNQFQVKDVRWNAELGGQNMELRLVEHFADEFNKQVGGGIDVRKFPKAMAKLKKQVKRTKEILSANTAAPISVESLHNDIDFRSSITREKFEELCDDIWEQSLLPVKEVIEHSGLSMDQIYAVELIGGATRVPKLQAKLQEFLGRKQLDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMIDGSLYGFVVELDGPDLLKDESSRQLLVPRMKKLPSKMFRSVSHNKDFEVLLAYESENHLPPGVTSPEIAKYQISGLTDASEKYSSRNLSSPIKAIIHFSLSRSGILSLDRADAVIEITEWVEKAVKKWKLIVGVIQKLKKKTFRVPLKIVEKEPGLSLSKDFLAEAKGKLEALDKKDAERKRTAELKNNLEGYIYTTKEKIETVEEFEKVSTSEERQSFVEKLDEVQDWLYTDGEDANATEFQERLDMLKAVGDPVFFRLKELTARPAAIEHAQKYLEELKQIVQEWKVNKSWLPKERVDAILDDAEKLKKWLDEKETEQQKISGFSTPAFTSEEVLLKVFDLQNKVASVNKIPKPKPKIQKPVKNETESKVQEDSGNSNSTSTAGDQSGDSSEGTSEEFADNQEGPSDEKNDEQTEVHDEL 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00094 856 Pfam Hsp70 protein 28 691 IPR013126 GO:0005524|GO:0140662
Adu04g00094 856 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 429 571 IPR029047 -
Adu04g00094 856 SUPERFAMILY Actin-like ATPase domain 219 421 IPR043129 -
Adu04g00094 856 Coils Coil 704 724 - -
Adu04g00094 856 MobiDBLite consensus disorder prediction 838 856 - -
Adu04g00094 856 CDD HYOU1-like_NBD 29 419 - -
Adu04g00094 856 SUPERFAMILY Actin-like ATPase domain 27 213 IPR043129 -
Adu04g00094 856 PANTHER HSC70CB, ISOFORM G-RELATED 571 785 - -
Adu04g00094 856 PANTHER HSC70CB, ISOFORM G-RELATED 21 560 - -
Adu04g00094 856 MobiDBLite consensus disorder prediction 807 836 - -
Adu04g00094 856 Gene3D - 93 148 - -
Adu04g00094 856 PRINTS 70kDa heat shock protein signature 404 424 - -
Adu04g00094 856 PRINTS 70kDa heat shock protein signature 26 39 - -
Adu04g00094 856 PRINTS 70kDa heat shock protein signature 58 70 - -
Adu04g00094 856 PRINTS 70kDa heat shock protein signature 372 388 - -
Adu04g00094 856 PRINTS 70kDa heat shock protein signature 168 188 - -
Adu04g00094 856 PANTHER HEAT SHOCK 70 KDA PROTEIN 17 571 785 - -
Adu04g00094 856 PANTHER HEAT SHOCK 70 KDA PROTEIN 17 21 560 - -
Adu04g00094 856 MobiDBLite consensus disorder prediction 787 856 - -
Adu04g00094 856 Gene3D - 592 706 IPR029048 -
Adu04g00094 856 ProSitePatterns Heat shock hsp70 proteins family signature 3. 375 389 IPR018181 -
Adu04g00094 856 Gene3D - 30 419 - -
Adu04g00094 856 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 619 701 IPR029048 -
Adu04g00094 856 Gene3D - 214 401 - -
Adu04g00094 856 Gene3D Actin; Chain A, domain 4 268 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00094 Adu-Chr4 1004604 1014747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00094 23 694 Calmodulin-binding Proteins AT3G12580 26.901 6.26e-72 247