Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00084 ATGGATTCCGAGGCTGGCGTTGTGGAGAAAGATCCAACTGCGCGATATGTACGGTATGATGAATTGTTGGGGAAAGGAGCGTTCAAAACTGTATTGTACTCTGAGGTTCATTTCCTCAAGTCATTGAAGCACGAGAATATCATCAAATTCTACAATTCTTGGGTCAATGAAAAATCCCGGACTATCAACATCATCACCGAGTTGTTTACCTCTGGCAGTTTGAGGCAATATAGAAAGAAACACAAGAACATTGATATGAAAGCCATGAAGAATTGGTTGAGGCAGATTCTTCGAGGATTATGCTATCTGCATGGCCATAATCCGCCCATAATTCATAGGGATCTGAAATGTGATAACATCTTCGTCAACGGTAATACTGGACGTGTTAAGATTGGAGATCTTGGATTGGCAGTTGTGATGCAGCAGCCTCTTGCTCAGAGTGTTATAGGCACGCCTGAATTTATGGCACCGGAACTTTATGAAGAACAATATAATGAACTTGTTGACATATATTCTTTTGGCATGTGTGTGTTGGAAATGGTCACCTGTGAATACCCATATAGTGAATGTAGAAATCCGGCACAGATATATAAGAAAGTTACTTCTGGTATAAAGCCTGCCGCTCTGGCTAAAGTACATGATTTGAAATTGAGAGAATTTATTGAGAAGTGTCTAGTTCCAGCAGCTATGCGACTGCCGGCGTCTGAACTGTTGAAAGACCCATTCCTTGTTGCTGAAAGCCCGAAGGAGATCAATCATGATACACTACTGCAGCTGACTAATCCGCCAATATCTGAGCCTTGTCCTATGGAGACAGACTCAAGCTCCAGGCATACTTCACATGGTTCCTCTGTGAGTAGTATTGAAGAAACTTCCTTAGTTTCAGTGTTCGATCTTCTGCAGGTGACTCAGAAAAACGAATTCCGGTTAAGAGGGGAGAAAACTGCCACCAGTACAATTTCACTTACCCTGCGAATTGCCGATGCATGCGGTCGAGCAAGGAATATCCATTTTCCGTTTTATACCCATTCTGACACGGCCAATTCAATTGCTGTGGAGATGGTTGAGCACCTGGAACTTGCGAAGGAGGATGTAACTGTGATTGCTGAGCTAATACAAAACATGATTCTGAAGCTCATGCCCAACTGGAAACCTTCCTCTCATTCCTCTCTCAACTTGTCATCTGAAAAAGATCACTTGTACAAGCCTTCGGAAGAACTTCGGAGCTGTGGAACATCAAGTTGCCAGTGGCCATCACTATCAAGTGTTTTTGATACAAAAGCAATTCAAGATGATTCTGTTCGCTTACATCATGATGGAGAAAATCATTATATACAAGAATCTGTTATGTCAGAGATTTCATCAGAGTATGGGACTACATTTGCTTTAGATTCGAAGAGTGAAGAGCATGATAGCTTTAGTATGGACGGATGCTGCAAAGGTTCCAATGGCTTAAATACCAATTCAGATGCCGGGTTCTGTGCTCAAGATGATAATGAACAATCAGAGAAATCAGCAGGCGTTATCAATTCACAATGCAGTGCATTCGAAAACTTTGACGTGTCAAGTATATGTTCTGTTGCTCTAGCCGGCATAGATAATTCAAACGAGCTACAGCTGGAGCTTGATGCAATAGAAACGCAGTATCACCAATGTTTTCGTGAGCTCGTGAAGATGAGGGAGGACGCCATAGAAAACGCCAAAAGGAGGTGGATTACAAGGAAGAAAATATCAGTTATGTGA 1743 0.4211 MDSEAGVVEKDPTARYVRYDELLGKGAFKTVLYSEVHFLKSLKHENIIKFYNSWVNEKSRTINIITELFTSGSLRQYRKKHKNIDMKAMKNWLRQILRGLCYLHGHNPPIIHRDLKCDNIFVNGNTGRVKIGDLGLAVVMQQPLAQSVIGTPEFMAPELYEEQYNELVDIYSFGMCVLEMVTCEYPYSECRNPAQIYKKVTSGIKPAALAKVHDLKLREFIEKCLVPAAMRLPASELLKDPFLVAESPKEINHDTLLQLTNPPISEPCPMETDSSSRHTSHGSSVSSIEETSLVSVFDLLQVTQKNEFRLRGEKTATSTISLTLRIADACGRARNIHFPFYTHSDTANSIAVEMVEHLELAKEDVTVIAELIQNMILKLMPNWKPSSHSSLNLSSEKDHLYKPSEELRSCGTSSCQWPSLSSVFDTKAIQDDSVRLHHDGENHYIQESVMSEISSEYGTTFALDSKSEEHDSFSMDGCCKGSNGLNTNSDAGFCAQDDNEQSEKSAGVINSQCSAFENFDVSSICSVALAGIDNSNELQLELDAIETQYHQCFRELVKMREDAIENAKRRWITRKKISVM 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00084 580 Gene3D - 318 408 - -
Adu04g00084 580 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 320 376 IPR024678 GO:0004674|GO:0005524
Adu04g00084 580 Pfam Protein kinase domain 30 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00084 580 SUPERFAMILY Protein kinase-like (PK-like) 16 243 IPR011009 -
Adu04g00084 580 CDD STKc_WNK 15 243 - -
Adu04g00084 580 PANTHER WNK KINASE 32 575 - -
Adu04g00084 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 110 122 IPR008271 GO:0004672|GO:0006468
Adu04g00084 580 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 31 - -
Adu04g00084 580 PANTHER WNK KINASE 4 31 - -
Adu04g00084 580 MobiDBLite consensus disorder prediction 267 286 - -
Adu04g00084 580 Gene3D Transferase(Phosphotransferase) domain 1 69 249 - -
Adu04g00084 580 SMART serkin_6 17 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00084 580 ProSiteProfiles Protein kinase domain profile. 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00084 580 Gene3D Phosphorylase Kinase; domain 1 33 67 - -
Adu04g00084 580 Gene3D Phosphorylase Kinase; domain 1 1 32 - -
Adu04g00084 580 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 32 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00084 Adu-Chr4 900807 903396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00084 4 579 MAP Kinase Kinase Kinase AT5G41990 46.972 1.76e-173 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Adu04g00084 Pkinase 8.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00084 K08867 - gmx:100783717 708.368