Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00082 ATGAAGGGGTTAAAGCAGAGCACTCAAACTCAAGTAGTATTCATGCTTTGCATTCTTAGTTTGCTTGTACTCCCAAATTTAGTGGCATCTGAGTGTACATGTGATAAATCAGAAGAAACACATGACAAAGCAAAGGCACTAAGGTTTAAGATAGTAGCTCTTGTTTCTATTCTCATGGCGAGTACAATTGGTGTTTGTATTCCGCTTCTTGGTAAAATCATACCTGCCATAAGTCCAGAGAAGGACATCTTCTTCTTAATTAAGGCCTTTGCGGCTGGTGTTATACTGGCCACTGGTTTCATTCATGTGTTGCCGGATGCATTTGAAAATCTAACCTCGCCTTGTTTGAGCGATCATCCTTGGGGAGATTTTCCTTTCACTGGATTTGTGGCCATGTGCACTAGCATGGGAACTCTCATGGTGGATGCTTATGCCACTGCTTATTTTCAGAAATCACATCTTCAGAAAGCACAAGTGGCCGTTACAGATGTAGAGAAAGAAGAGGAGCATGTTGAGAAGAATGACGTGGATCTTCACACCCATGTGACACATGGTCATGCACATGGTCACGTTTCTAGTAATAAGTCTTCAGAACTCTTTCGTCATCGCGTCATATCGCAGGTATTGGAGTTGGGAATTGTTGTTCATTCGGTGGTGATAGGAATTACTTTGGGAGCGTCAATGAATTCAGAAACAATAAGACCTCTTGTTGCTGCGTTGACTTTTCATCAGTTCTTTGAAGGCATGGGACTTGGAAGTTGCATCACTCAGGCAAAATTTAAAAGATTATCTGTTATAGTCATGGGATTGTTCTTCTCTCTAACTACGCCAGTGGGAATTGCAATCGGCATAGGAATCTCTAATGTTTATGATGATAATAGTCCAACTGCTCTTATTGTGGAAGGAATTTTTAACGCAGCTTCAGCTGGAATCTTAATCTATATGGCGCTTAGGCTGTGGCGGCATCGGCATGAGATTGCGGCGGTGTCGGCACGGACTGCTGTGGGACAGTGGCGCGAGGTGAAGCTACGGTGGCGTCGTCACGGGCTGCGAAATTTTTCTGCGTTTGAACAGGGTGATGAGAAACAACGGCGTTCTACTGCGTCTGAACGGCTGTCTTCGACGACAATGTCAAGTTGTGGTGGGGTACTGGAGAGGACTATGTGA 1167 0.4422 MKGLKQSTQTQVVFMLCILSLLVLPNLVASECTCDKSEETHDKAKALRFKIVALVSILMASTIGVCIPLLGKIIPAISPEKDIFFLIKAFAAGVILATGFIHVLPDAFENLTSPCLSDHPWGDFPFTGFVAMCTSMGTLMVDAYATAYFQKSHLQKAQVAVTDVEKEEEHVEKNDVDLHTHVTHGHAHGHVSSNKSSELFRHRVISQVLELGIVVHSVVIGITLGASMNSETIRPLVAALTFHQFFEGMGLGSCITQAKFKRLSVIVMGLFFSLTTPVGIAIGIGISNVYDDNSPTALIVEGIFNAASAGILIYMALRLWRHRHEIAAVSARTAVGQWREVKLRWRRHGLRNFSAFEQGDEKQRRSTASERLSSTTMSSCGGVLERTM 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00082 388 Pfam ZIP Zinc transporter 48 317 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Adu04g00082 388 TIGRFAM zip: ZIP zinc/iron transport family 32 317 IPR004698 GO:0005385|GO:0016021|GO:0071577
Adu04g00082 388 PANTHER ZINC TRANSPORTER 1 20 317 - -
Adu04g00082 388 PANTHER ZINC/IRON TRANSPORTER 20 317 - -
Adu04g00082 388 Coils Coil 154 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00082 Adu-Chr4 870559 879094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00082 16 317 Inorganic Solute Cotransporters AT3G12750 52.922 2.44e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00082 K14709 - gmx:100789557 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00082 04 870559 879094 Adu04g00082 04 870559 879094 ECH
Adu04g00082 04 870559 879094 Adu07g00024 07 341365 342938 PCT