Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00059 ATGGATTCATCTGAGCTGGATGGAAATGGTACCGAGGCATCCCTGCCACCACCACCCCCTGTTGTTCCACCTGATGTTGTCCCAGTTAAAGCAGAAGACGCACTTGCTGAACCTGTTAAGAAAAAGGTTTCTCGCCTTCCGATTGCCAGGCGTGGGCTGGGATCAAAAGGAATGAAGATAGCTCTTCAAACCAATCACTTCAAAGTTAATGTCACTAACAATGATGGAAATTTCTTCCATTATAGCGTTGCGTTTGCTTATGAAGATGGACGCCCTGTAGAAGGTAAGGGTTTCGGGAGAAGGATAATGGATAGGGTGCATGAGACGTATGCTTCTGAGTTAAATGGTAAGGACTTCGCATACGACGGGGAGAAAAGTCTGTTTACCATTGGTGCTCTTCCAAGCAACAAGCTTGAGTTTGAAGTTGTTCTGGAGGATGTTGTTTCGAATAGAAATAATGGTAACTGTAGCCCTGATGGTCATGGGGACAATGAAAGTGACAAAAAGAGGATGCGACGCCCGTATCGTGCGAAGAAATTTAAAGTAGAGATTAGCTATGCCGCCAAAATTCCAATGCAGGCCATTGCCAATGCCTTGCGTGGGCAGGAATCGGAGAATTTCCAAGAAGCCATCAGAGTGCTCGATATTATATTGAGGCAACATGCTGCTAAACAAGGTTGCCTCCTAGTTCGGCAATCCTTCTTCCACAATGACCCAAGGAATTTTGCTGAAGTTGGAGGTGGTGTGCTTGGCTGCAGAGGATTCCATTCAAGTTTCAGAACTACTCAGAGTGGCCTGTCTCTGAACATAGATGTCACAACTACTATGACAATCCAGCCTGGACCTGTTGTGGACTTCCTAATTGCCAATCAAAATGTGCGAGATCCATTTCAGCTTGACTGGGCAAAGGCCAAAAGGACCCTAAAAAATCTGAGGATTAAAGTAAGCCCATCCAATCAAGAGTACAAAATTACAGGTCTCAGTGAACTCCCATGCCGAGATCAGACGTTTTCTCTTAAGAAAGGTGGAAGGGATGGTGATGATGGTACTGAAGAAGTGACTGTTTATGATTATTTTGTCAATGCTCGTAGGATAGATCTTCGATACTCTGCTGAGCTTCCTTGTATCAATGTTGGCAAGCCTAAACGACCGACATACTTCCCCATTGAGCTTTGTGAATTGGTGTCCTTGCAACGTTATACAAAAGCGCTGTCCACGCTTCAAAGGGCTTCATTGGTAGAGAAGTCCAGGCAGAAGCCACCAGAGAGGATGAGGGTTTTATCTGATGCACTAAAAACCAGCAACTATGGTTCTGAACCTATGCTTCAAAATTGTGGAATTTCTATAAGCACTGGCTTTACTCAAGTGGATGGTCGGGTTCTGCCTTCACCAAGGTTGAAGCTTGGCAATGGTGAGGACTTAAATCCAAGGAATGGGAGATGGAATTTTAGTAATAAGAGTTTTGTGCAGCCAATAAAGATAGAACGGTGGGCTGTAGTTAACTTTTCTGCACGATGTGATGTAAGAGCTCTTGTGAGGGATATGATTAGAGTTGCAGGAACGAAAGGAATTTCAATGGAAGATCCATTTGATGTGCTTGAAGAGAGTCACCAGTTTAGGCGTTCCCCACCAATGGTTAGAGTGGAGAAGATGTTTGAAAGCATGCAGTCTAAACTTCCTGGAGTTCCTCAGTTCCTTCTATGTCTAATTCCCGAGAGGAAAAACTGTGAAATTTATGGTCCATGGAAAAAGAAAAATCTTACCGAGTATGGAATTGCTAGCCAGTGCATGTGTCCTTTAAGGGTCAATGACCAGTTTCTGACTAACGTTTTGATGAAGATAAATGCCAAGCTTGGTGGATTGAATACATTATTAGGCGTTGAACACTCTCCAGCTCTTCCAGTCGTTTCAAAAGCACCCACACTTATCCTGGGCATGGATGTTTCGCATGGCTCACCAGGGCAATCTGATATTCCTTCAATTGCAGCGGTGGTCAGCTCTAGACAATGGCCTCTTATATCGAAGTATAGGGCCTGTGTTCGTACCCAGTCCGCAAAGGTTGAAATGATAGATAACCTGTTCAAGAAAGTATCTGACAAAGATGATGATGGAATTATAAGGGAACTTCTACTTGATTTCTATGTTACTTCTGCGAAGCGAAAGCCAGACAATATAATTATTTTCAGGGATGGTGTTAGTGAATCACAGTTCAATCAAGTTTTGAACAAAGAGCTTGATCAAATCATTGAGGCATGTAAATTCCTTGATGAAAAGTGGGAGCCCAAGTTTGTGGTTATAGTTGCTCAGAAGAACCACCACACAAGATTCTTCCAGTCTGGTTCTCCTGACAATGTCCCACCTGGAACTGTTGTTGACAACAAAATTTGTCATCCAAGAAACTATGATTTCTACCTATGTGCACATGCTGGAATGATAGGCACTAGCAGGCCTACACACTACCATGTTCTTCATGATGAGGTTGGTTTTAGTGCTGATGAGCTACAGGAGCTTGTACATTCTCTGTCATATGTGTATCAGAGGAGCACCACTTCCATTTCTGTTGTTGCTCCAATATGCTACGCACACTTGGCTGCAACCCAGGTGGGGCACTTCCTCAAATTTGAAGACAAATCTGAGACATCCTCAAGTCATGGTGGACTGAGTGCCGCTGGAGCTGTCCCTGTCCCGCAGTTGCCGAAATTGCAGGACAGTGTTTCCAACTCAATGTTCTTCTGCTGA 2739 0.4396 MDSSELDGNGTEASLPPPPPVVPPDVVPVKAEDALAEPVKKKVSRLPIARRGLGSKGMKIALQTNHFKVNVTNNDGNFFHYSVAFAYEDGRPVEGKGFGRRIMDRVHETYASELNGKDFAYDGEKSLFTIGALPSNKLEFEVVLEDVVSNRNNGNCSPDGHGDNESDKKRMRRPYRAKKFKVEISYAAKIPMQAIANALRGQESENFQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPRNFAEVGGGVLGCRGFHSSFRTTQSGLSLNIDVTTTMTIQPGPVVDFLIANQNVRDPFQLDWAKAKRTLKNLRIKVSPSNQEYKITGLSELPCRDQTFSLKKGGRDGDDGTEEVTVYDYFVNARRIDLRYSAELPCINVGKPKRPTYFPIELCELVSLQRYTKALSTLQRASLVEKSRQKPPERMRVLSDALKTSNYGSEPMLQNCGISISTGFTQVDGRVLPSPRLKLGNGEDLNPRNGRWNFSNKSFVQPIKIERWAVVNFSARCDVRALVRDMIRVAGTKGISMEDPFDVLEESHQFRRSPPMVRVEKMFESMQSKLPGVPQFLLCLIPERKNCEIYGPWKKKNLTEYGIASQCMCPLRVNDQFLTNVLMKINAKLGGLNTLLGVEHSPALPVVSKAPTLILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQSAKVEMIDNLFKKVSDKDDDGIIRELLLDFYVTSAKRKPDNIIIFRDGVSESQFNQVLNKELDQIIEACKFLDEKWEPKFVVIVAQKNHHTRFFQSGSPDNVPPGTVVDNKICHPRNYDFYLCAHAGMIGTSRPTHYHVLHDEVGFSADELQELVHSLSYVYQRSTTSISVVAPICYAHLAATQVGHFLKFEDKSETSSSHGGLSAAGAVPVPQLPKLQDSVSNSMFFC 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00059 912 CDD Piwi_ago-like 440 872 IPR045246 -
Adu04g00059 912 Pfam Piwi domain 566 872 IPR003165 GO:0003676
Adu04g00059 912 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 3 911 - -
Adu04g00059 912 SMART Piwi_a_2 565 873 IPR003165 GO:0003676
Adu04g00059 912 Pfam Mid domain of argonaute 475 528 IPR032473 -
Adu04g00059 912 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 3 911 - -
Adu04g00059 912 Pfam PAZ domain 284 412 IPR003100 GO:0005515
Adu04g00059 912 Gene3D - 460 626 - -
Adu04g00059 912 Gene3D - 633 912 IPR036397 GO:0003676
Adu04g00059 912 Pfam Argonaute linker 2 domain 422 467 IPR032472 -
Adu04g00059 912 ProSiteProfiles Piwi domain profile. 565 873 IPR003165 GO:0003676
Adu04g00059 912 MobiDBLite consensus disorder prediction 1 24 - -
Adu04g00059 912 SUPERFAMILY Ribonuclease H-like 549 871 IPR012337 -
Adu04g00059 912 CDD PAZ_argonaute_like 280 395 - -
Adu04g00059 912 Pfam N-terminal domain of argonaute 59 218 IPR032474 -
Adu04g00059 912 Pfam Argonaute linker 1 domain 230 277 IPR014811 -
Adu04g00059 912 Gene3D paz domain 274 400 - -
Adu04g00059 912 ProSiteProfiles PAZ domain profile. 322 396 IPR003100 GO:0005515
Adu04g00059 912 Coils Coil 738 758 - -
Adu04g00059 912 SUPERFAMILY PAZ domain 275 436 IPR036085 GO:0005515
Adu04g00059 912 SMART DUF1785_2 228 280 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00059 Adu-Chr4 621439 629400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00059 38 912 Eukaryotic Initiation Factors Gene Family AT1G48410 35.205 7.40e-164 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00059 K11593 - gmx:100820376 1570.44