Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00056 ATGGGTTGGAGATGTTGGTGTGTGGTTCTGGTTGTTGTTCTTCTTCAACCCCTCATAGATTCTGCTTCTGCGAGCTCCATTGTTAAGAACCTACCGGGTTATGACGCCCATCTTCCATTCAACCTTGAAACCGGGTCAGTACTTATAATTTATTTTTCCTTTTTATTTCAAGTCATTATTATAATAACAAAGTTTAGACCTCTAAGAATGAATCGAAGTTTGAGTGGAAATATTCCGAAACTTGAGCTGAACCCATACTCTTGGACCCATATGTTGAACATGTTATACATAGATATCCCAGTGGGCACTGGATTTTCTTACTCAAAAACGCAACAAGGTTACTATAGTAGTGACACATTATGGGTTGACCATACGTATGCTTTTCTACAAAAGTGGTTTATTGATCATCCAAAGTTCAACTCAAATCCATTTTACGTTGGTGGTGGCTCGTATTCAGGATCTCCTACTGCTCCTCTCGTTCAAAAATTATATGATGGTTACGTAGCAGGTCGTGTACCACGCATTAATATCAAAGGTTATGTGATTGCAAGCCCAGCGGTGGATGCATATGAGAGCGAGAACACGAAAGTGTTGTATGCATACCAGATGTCTCTCATACCAGAATTACTCTATCAGTCGATAAAAGAACATTGTGGTGGTAATTATGTAAATATTGATCCAGAAGACACAAAGTGTGTTTCAGATTATGAAGCTTATTCCGAGTTAATTCGTTACATAAATCCACAACAAATTTTGGAACCTTTGTGTGAAACGACACCTGGTATGAATCATGGAATTTTACAATCCTCACTTCAACATCCTTCAGAATTTTGGTGTAGAAGTTATTCTCACATTCTTGTGAACACATGGGCAAATGATCAAAGTGTGAGGAAAGCCTTGTACATTAGAGAGGGAACTAAGGGAGAGTTCTTGAGATGCAACAAGACTTTGGCATATAACGTCACTCTACTCAGCGTTGCAGGATATTATCAAAATTTGACCAAGGCCAACATCCAAGCTCTAGTTTACTGTTCTGATCTTGATATGTCGATACCACACATAGCTACACAAAATTGGATAAAGTCATTAAAGCTTAGCATATATGACAAGTGGCGTGCATGGTTTGTTGATGGTCAAGTGGCCGGATTTACGGAAATTTACAAAATGAAAGAAGACCATTACTTAACATATGTGTCAGTAAAGGGTGCTGGACATGTAGCCCAGACATTTAAACCCAAGGAAGTTTACCATATGATAAAGAGGAGGCAACGTGGATGGTTCGACGCAAACCTGCGCAAACTGGCTGATTCGACCCAAACCTGTGAATCGGGCGAGTCATTTCTTGCTCCAACGCATGCTCCTCATGTTGTTTCACGGAAAAGAAAAGATTACCGTAGTTATAGAATCAAAACAACGACCTCCCTCTCTCAATATGGCGTGACTTCCATTCTCTCCATTTCTCCGAGAATCTCGCTGGTGCAGTGCCGCCACAATCACCGCCTGCTGTCCGAGTCTGTTCTGACCGGCCTCTCGTCCGCACAGTCCACCGCCCAGCACGACGTTCCTTTCGTTAGGTAG 1578 0.4144 MGWRCWCVVLVVVLLQPLIDSASASSIVKNLPGYDAHLPFNLETGSVLIIYFSFLFQVIIIITKFRPLRMNRSLSGNIPKLELNPYSWTHMLNMLYIDIPVGTGFSYSKTQQGYYSSDTLWVDHTYAFLQKWFIDHPKFNSNPFYVGGGSYSGSPTAPLVQKLYDGYVAGRVPRINIKGYVIASPAVDAYESENTKVLYAYQMSLIPELLYQSIKEHCGGNYVNIDPEDTKCVSDYEAYSELIRYINPQQILEPLCETTPGMNHGILQSSLQHPSEFWCRSYSHILVNTWANDQSVRKALYIREGTKGEFLRCNKTLAYNVTLLSVAGYYQNLTKANIQALVYCSDLDMSIPHIATQNWIKSLKLSIYDKWRAWFVDGQVAGFTEIYKMKEDHYLTYVSVKGAGHVAQTFKPKEVYHMIKRRQRGWFDANLRKLADSTQTCESGESFLAPTHAPHVVSRKRKDYRSYRIKTTTSLSQYGVTSILSISPRISLVQCRHNHRLLSESVLTGLSSAQSTAQHDVPFVR 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00056 525 SUPERFAMILY alpha/beta-Hydrolases 28 425 IPR029058 -
Adu04g00056 525 Pfam Serine carboxypeptidase 77 421 IPR001563 GO:0004185|GO:0006508
Adu04g00056 525 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 73 421 IPR001563 GO:0004185|GO:0006508
Adu04g00056 525 Gene3D alpha/beta hydrolase 50 428 IPR029058 -
Adu04g00056 525 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 73 421 - -
Adu04g00056 525 PRINTS Carboxypeptidase C serine protease (S10) family signature 84 96 IPR001563 GO:0004185|GO:0006508
Adu04g00056 525 PRINTS Carboxypeptidase C serine protease (S10) family signature 395 408 IPR001563 GO:0004185|GO:0006508
Adu04g00056 525 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 157 IPR001563 GO:0004185|GO:0006508
Adu04g00056 525 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 107 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00056 Adu-Chr4 585586 594306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00056 290 421 Calmodulin-binding Proteins AT2G22960 40.909 5.82e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00056 K16296 - gmx:100798023 454.907