Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu04g00040 | ATGGGCAATTGTTGCTCCCAAGGCAACGCCGCCGATGCCCCGGAGGCCGACAATGCGGCCACCGCAACCAAGGGAGACTCAAACCAACAACAAACCACAGACAATGGAGGCACCGACAACAATAATAATAATAATAACAACAATGAAAGCCCATCCACAAGCCCTCCGGCCAGCAAGCCTCCACCACCCTCAACTACATCTCCTCCATCAACAACAAAACCCACAAAGCCCGGGCCTATCGGGCCCGTGCTGGGGAGGCCAATGGAGGACATAAAAGCGTCATATAGTCTGGGTAAGGAGCTAGGTAGAGGCATGTTTGGGGTAACATATTTATGCACCCACAAGGCAACAGGAAAACAATTTGCATGCAAAACAATTGCGAAGAGGAAGCTAGTGAATAAGGAGGATATAGAGGACGTTAGAAGGGAGGTGCAGATCTTGTACCACCTGTCAGGGCAGCCTAACATCGTAGAGCTGAAAGGTGCCTATGAGGACAAACAATCTGTTCATTTAGTGATGGAATTGTGTGCGGGTGGTGAACTCTTTGATCGTATCATTGCCAAGGGCCACTATACGGAGCGTGCCGCTGCTACCTTGTTAAGAACCATTATGGAGATTGTCCACACTTTTCACTCTCTTGGTGTCATTCATAGAGATCTCAAGCCTGAGAATTTCCTCTTGTTGAGCAAGGACGAAGATGCTCCCCTTAAAGCCACGGATTTTGGTTTATCCGTTTTTTACAAGCAAGGAGATGTTTTCAAAGACATTGTTGGTAGTGCATACTACATTGCACCTGAAGTATTGAAAAGGAAATATGGTCCAGAGGTTGATATATGGAGTGTTGGTGTTATGCTATACATTCTTTTATGTGGAGTTCCTCCATTTTGGGCAGAATCTGAACATGGCATATTCAATGCCATCCTAAGAGGTCACGTTGACTTTTCAAGCGATCCATGGCCTTCAATTTCACCATCAGCAAAAGATCTTGTACGAAAAATGTTGAATTCAGATCCTAAACAAAGGCTTACAGCTTATGAAGTTTTGAATCATCCTTGGGTTAAGGAAGATGGAGAAGCACCAGATAAGCCTATTGATAATGCTGTGCTAAGTAGGCTCAAACAATTCAAAGCAATGAATGAATTCAAGAAAGTTGCTTTAAGGGTTATTGCAGGATGTTTATCAGAAGAAGAAATTATGGGGTTAAAGGAAATGTTTAAGGGAATGGACACTGATAATAGTGGAACCATTACAATTGAAGAACTTAAGCAGGGGCTTGCAAAGCAAGGGACAAAGCTATCAGAACAAGAAGTTCAACAATTACTGGATGCAGCAGATGCTGATGGAAATGGTACCATAGACTATGATGAATTCATCACAGCAACAGTGCACGTGAACAGAATGAACAGAGAAGAACATCTTTATAAAGCCTTCCAATACTTTGATAAAGATAATAGCGGGTTTATCACCACTGAAGAATTAGAGCAAGCTCTCCATGAATACAACATCCACGATGGAAGAGACATCAATGAAATCGTTCAAGAAGTTGATGTAGATAAGGATGGTCGTATTAACTATGAAGAGTTTGTGGCAATGATGAGAAAAGGACAAGCTGAAGCTCATACAAAAAAGAGACGTGAATCACTTAATTTGCATCAATAG | 1659 | 0.4262 | MGNCCSQGNAADAPEADNAATATKGDSNQQQTTDNGGTDNNNNNNNNNESPSTSPPASKPPPPSTTSPPSTTKPTKPGPIGPVLGRPMEDIKASYSLGKELGRGMFGVTYLCTHKATGKQFACKTIAKRKLVNKEDIEDVRREVQILYHLSGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAATLLRTIMEIVHTFHSLGVIHRDLKPENFLLLSKDEDAPLKATDFGLSVFYKQGDVFKDIVGSAYYIAPEVLKRKYGPEVDIWSVGVMLYILLCGVPPFWAESEHGIFNAILRGHVDFSSDPWPSISPSAKDLVRKMLNSDPKQRLTAYEVLNHPWVKEDGEAPDKPIDNAVLSRLKQFKAMNEFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITIEELKQGLAKQGTKLSEQEVQQLLDAADADGNGTIDYDEFITATVHVNRMNREEHLYKAFQYFDKDNSGFITTEELEQALHEYNIHDGRDINEIVQEVDVDKDGRINYEEFVAMMRKGQAEAHTKKRRESLNLHQ | 552 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu04g00040 | 552 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 396 | 431 | IPR002048 | GO:0005509 | |
Adu04g00040 | 552 | MobiDBLite | consensus disorder prediction | 54 | 76 | - | - | |
Adu04g00040 | 552 | Gene3D | - | 361 | 541 | - | - | |
Adu04g00040 | 552 | MobiDBLite | consensus disorder prediction | 1 | 87 | - | - | |
Adu04g00040 | 552 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 215 | 227 | IPR008271 | GO:0004672|GO:0006468 | |
Adu04g00040 | 552 | ProSitePatterns | EF-hand calcium-binding domain. | 445 | 457 | IPR018247 | - | |
Adu04g00040 | 552 | Pfam | Protein kinase domain | 95 | 353 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Adu04g00040 | 552 | ProSitePatterns | Protein kinases ATP-binding region signature. | 101 | 128 | IPR017441 | GO:0005524 | |
Adu04g00040 | 552 | SUPERFAMILY | Protein kinase-like (PK-like) | 94 | 358 | IPR011009 | - | |
Adu04g00040 | 552 | SMART | serkin_6 | 95 | 353 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Adu04g00040 | 552 | Gene3D | Phosphorylase Kinase; domain 1 | 97 | 180 | - | - | |
Adu04g00040 | 552 | PANTHER | CALMODULIN-DOMAIN KINASE CDPK PROTEIN | 38 | 541 | - | - | |
Adu04g00040 | 552 | ProSitePatterns | EF-hand calcium-binding domain. | 516 | 528 | IPR018247 | - | |
Adu04g00040 | 552 | Pfam | EF-hand domain pair | 401 | 461 | IPR002048 | GO:0005509 | |
Adu04g00040 | 552 | Pfam | EF-hand domain pair | 470 | 533 | IPR002048 | GO:0005509 | |
Adu04g00040 | 552 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 432 | 467 | IPR002048 | GO:0005509 | |
Adu04g00040 | 552 | SMART | efh_1 | 436 | 464 | IPR002048 | GO:0005509 | |
Adu04g00040 | 552 | SMART | efh_1 | 400 | 428 | IPR002048 | GO:0005509 | |
Adu04g00040 | 552 | SMART | efh_1 | 472 | 500 | IPR002048 | GO:0005509 | |
Adu04g00040 | 552 | SMART | efh_1 | 507 | 535 | IPR002048 | GO:0005509 | |
Adu04g00040 | 552 | ProSitePatterns | EF-hand calcium-binding domain. | 409 | 421 | IPR018247 | - | |
Adu04g00040 | 552 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 38 | 541 | - | - | |
Adu04g00040 | 552 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 507 | 538 | IPR002048 | GO:0005509 | |
Adu04g00040 | 552 | CDD | STKc_CAMK | 95 | 352 | - | - | |
Adu04g00040 | 552 | ProSiteProfiles | Protein kinase domain profile. | 95 | 353 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Adu04g00040 | 552 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 468 | 503 | IPR002048 | GO:0005509 | |
Adu04g00040 | 552 | SUPERFAMILY | EF-hand | 393 | 534 | IPR011992 | - | |
Adu04g00040 | 552 | MobiDBLite | consensus disorder prediction | 21 | 53 | - | - | |
Adu04g00040 | 552 | ProSitePatterns | EF-hand calcium-binding domain. | 481 | 493 | IPR018247 | - | |
Adu04g00040 | 552 | Gene3D | Transferase(Phosphotransferase) domain 1 | 181 | 360 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu04g00040 | Adu-Chr4 | 375688 | 380616 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu04g00040 | 1 | 546 | EF-hand Containing Proteins | AT5G12180 | 78.755 | 0.0 | 887 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Adu04g00040 | Pkinase | 2.4e-74 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu04g00040 | K13412 | - | gmx:100781355 | 879.396 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu04g00040 | 04 | 375688 | 380616 | Adu07g00477 | 07 | 4719061 | 4721899 | PCT |