LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu04g00027	ATGGCTATTGGCAAAGAAACGATGCAACAACAACACAAGAAGGAGGAGGAGGAATTCATCTTCAAGTCCAGCCTTCCAGACATCTACATCCCCAACCACCTTCCCCTCCATTCCTACATCTTCCAGAACCTTCCGGACTTCGCCACGCGTCCCTGCCTCATCAACGCCCCAACCGGACAAGTTTTCACCTACTCCGACGTCGACCTCAAGGCCAGAAGAGTCGCCTCAGGCCTCCACAAACACGGAATCCGCCAAGGTGACGTCATCATGATCCTGCTCCCAAACTGCCCTCAATTCGTCTTCTCCTTCCTAGGCGCATCGTTCCGCGGCGCCATCGCCACCGCCGCCAACCCGTTCTTCACGGCCGCCGAGATAGCCAAGCAGGCCAAGGCCTCCAACGCCAGGCTGCTGGTAACGCAGTCCAGTTACTACGACAAGGTGAAGGACCTCCACGGCCACCTCAGCCTGGTGTTCGTGGACACTCCCCCGGAGGGGCACCTGCATTTCTCGGAGCTGGAAGAGGCCGACGAGGAAGACATCCCGGAGGTGAAGATCAGCCCGGAGGACGTGGTGGCGCTGCCGTACTCGTCGGGAACAACGGGACTGCCGAAAGGTGTGATGCTGAGTCACAGGGGGTTGGTGACGAGCGTGGGGCAGCAAGTGGACGGAGAGAACCCAAACCTTTACTATCACAGCGAGGATGTGATCATGTGCGTGCTCCCCATGTTCCACATATACTCCCTCAACTCCGTCCTGCTCTGCGGCCTCAGGGCCAAGGCTGCCATCGTCTTGATGCCCAAATTCGAGATCACTGCCTTCCTCGCCTTGGTGCAGAAGCATCGGGTCACCATATGCCCCGTCGTGCCTCCCATCATTCTCGCCATTGCAAAGTGCCCGGATCTCCACAACTACGACCTTTCTTCCATCCGAGTCCTTAAATCCGGCGGCGCTCCCCTCGCCAAGGACCTTGAAGACACCGTCCGCCTCAAATTCCCCAACGCCAAGCTTGGGCAGGGATATGGGATGACAGAGGCTGGTCCAGTGTTAACGATGTGCTTAACATTCGCCAAAGAAGCCATAGATGGAAAACCAGGTGCATGTGGCACCGTCGTCAGAAACGCTGAGTTGAAGATTGTTGATCCTGAAACCGAAAAATCTCTCCCGAGAAATCAACCGGGTGAAATTTGTATTAGGGGCCACCAGATCATGAAAGGTTATCTAAACGATCCAGAGGCAACAGAGAGAACAATTGACAAGGAAGGGTGGTTGCACACGGGTGACATCTTCTGA	1290	0.5597	MAIGKETMQQQHKKEEEEFIFKSSLPDIYIPNHLPLHSYIFQNLPDFATRPCLINAPTGQVFTYSDVDLKARRVASGLHKHGIRQGDVIMILLPNCPQFVFSFLGASFRGAIATAANPFFTAAEIAKQAKASNARLLVTQSSYYDKVKDLHGHLSLVFVDTPPEGHLHFSELEEADEEDIPEVKISPEDVVALPYSSGTTGLPKGVMLSHRGLVTSVGQQVDGENPNLYYHSEDVIMCVLPMFHIYSLNSVLLCGLRAKAAIVLMPKFEITAFLALVQKHRVTICPVVPPIILAIAKCPDLHNYDLSSIRVLKSGGAPLAKDLEDTVRLKFPNAKLGQGYGMTEAGPVLTMCLTFAKEAIDGKPGACGTVVRNAELKIVDPETEKSLPRNQPGEICIRGHQIMKGYLNDPEATERTIDKEGWLHTGDIF	429

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu04g00027	429	ProSitePatterns	Putative AMP-binding domain signature.	193	204	IPR020845	-
	Adu04g00027	429	PANTHER	4-COUMARATE--COA LIGASE 2-LIKE	14	428	-	-
	Adu04g00027	429	Gene3D	-	13	429	IPR042099	-
	Adu04g00027	429	PANTHER	LONG-CHAIN-FATTY-ACID--COA LIGASE	14	428	-	-
	Adu04g00027	429	SUPERFAMILY	Acetyl-CoA synthetase-like	22	428	-	-
	Adu04g00027	429	Pfam	AMP-binding enzyme	49	428	IPR000873	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu04g00027	Adu-Chr4	283647	286719	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu04g00027	6	425	Monolignol Biosynthesis Gene Families	AT1G51680	67.209	0.0	607

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu04g00027	K01904		-	gmx:100819192	644.81