Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00024 ATGAAGGACAAAGACAAGGACAAGGAAAAAGAGGCGGAGAAGAAGAAGTACCCTATCGGCGCCGAGCATTACGATCTCTACGAGGAGATTGGACACGGCGTCAGTGCCGCCGTCCACCGCGCGCTTTGCATCCCCTTAAACGAGATCGTCGCCATCAAGATCCTCGACTTCGAACGCGACAACTGCGATCTGAACAATGTTTCACGCGAAGCACAGACGATGGTGCTGGTGGACCACCCTAACGTGCTGAAATCGCACTGCTCCTTCGTCAACGAGCACAGCCTGTGGGTTGTGATGCCGTACATGGCGGGCGGATCGTGCCTCCATATCCTCAAGGCCGCGCACCCCGACGGATTCGAGGAGGTTGTGATTGCCACCATCCTTCGCGAGGTCCTCAAGGGTTTAGAGTACCTTCACCACCACGGACACATCCACAGGGACGTCAAGTCCGGCAACATTCTCATCGATTCCCGCGGCGCCATCAAGCTCGGCGACTTCGGTGTCTCCGCCTGTCTCTTTGATTCCGGTGATAGGCAGCGCACCAGGAATACTTTCGTTGGAACACCTTGTTGGATGGCACCCGAAGTAATGGAGCAGCTACATGGTTATAATTTCAAAGCTGACATTTGGTCATTTGGCATAACTGCACTGGAGCTTGCCCACGGTCATGCTCCTTTCTCAAAGTTTCCCCCAATGAAGGTACTGCTTATGACTTTGCAAAATGCACCCCCCGGCCTTGACTACGAGAGGGATAGAAAGTTCTCTAAGTCATTTAAGCAGATGATTGCTAGTTGCTTAGTGAAAGATCCTTCAAAACGACCCTCTGCAAGCAAGTTGTTGAAGCATTCCTTCTTCAAGCAGGCTCGCTCCAATGATTATATTGCACGAACACTTTTGGAGGGGCTGCCTGCTTTAGGTGACCGCATGGAGGCCCTAAAGAGAAAAGATGAAGATATGCTTGCACAAAAGAAAATGCCCGATGGCGAGATGGAGGAATTATCACAGAATGAATACAAACGGGGAATTAGTGGCTGGAACTTCAATCTTGATGATATGAAGGCTCAGGCTTCATTGATCCATGATTTTGATGATGCTATATCAGATATCAATCATGTAGCAAGTTCAGCTTCTTTATCTTCCCTTGATGTACAAGATAAGCCGAGTGCAAGTCATAATCCCTCTCGAAGTGTTGATCTGGAAGATATTGATGAGCTACAAAATCAATCAGCTTCTGTTCCAGGAATTGATTACACAGTAAATGATGCCAAGATCAAGTTTGAAAAATCTGACGATGACTCTAGCATTACCAGTTCAAGCCATGAACAAAGCATTTCACTAGCTTCTCCCTCCTGTCTTGATGATCGTGTGGACCATAATGTGGGAGAAAAATCTGATGTGGAAAACGGTATGGCTATCCATTCTTTTCATAGAAGAGGATCTTCATCAAGCATTTTACCTGAAGTAACTCTTCCACCAATTCGACCAGAAAGTGAGAAGCCACCCAATCTGCCCCAGAGCACCTCAAGTGGCAATGCAAATTCACAGACAGGAGAGGACGTGCTTACTGAACTTCCTTCTAAAATCTCAAAATCATCAGCTAATGCTGAAGAGACTGATGAGAAAGCAAAGATACCAGTTGTTCAGCAGAGAGGACGTTTTAAGGTTACATCTGAGAATGTTGACCCAGAAAAGGTGGCCCCTACTCCTGTACTGCAAAAGAGTCACAGTATGCAGATTATTAGCCAGCATAGTGCTCCTGCTCCTCTGCCTTCACCATTACCGTTACTGTCAGCATCTGATGCTACTATATCATCAAATCTTTCTGGCTGTTCACTTTTCCCGGTGTTGCACTCTGTGCTGCAGACAAATATTCTTCAAAGGGAGAGCATTTTAAATTTAATGAAGCAAATCAGTGCAAATGACACCACAGCTGATGCCACGTGTATCCCAGCACAAATAGCAGCTACTGAGAAATCTTTGCTTGAAGCAGCTCACGATAGGGAGAAAGAGTTACTCCATGAGATAACCGAGTTGCAGTGGAGGCTGATATGTACCCAAGAGGAGCTTCAAAAATTGAAGACAGATAACGCTCAGGTATGA 2100 0.4667 MKDKDKDKEKEAEKKKYPIGAEHYDLYEEIGHGVSAAVHRALCIPLNEIVAIKILDFERDNCDLNNVSREAQTMVLVDHPNVLKSHCSFVNEHSLWVVMPYMAGGSCLHILKAAHPDGFEEVVIATILREVLKGLEYLHHHGHIHRDVKSGNILIDSRGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSNDYIARTLLEGLPALGDRMEALKRKDEDMLAQKKMPDGEMEELSQNEYKRGISGWNFNLDDMKAQASLIHDFDDAISDINHVASSASLSSLDVQDKPSASHNPSRSVDLEDIDELQNQSASVPGIDYTVNDAKIKFEKSDDDSSITSSSHEQSISLASPSCLDDRVDHNVGEKSDVENGMAIHSFHRRGSSSSILPEVTLPPIRPESEKPPNLPQSTSSGNANSQTGEDVLTELPSKISKSSANAEETDEKAKIPVVQQRGRFKVTSENVDPEKVAPTPVLQKSHSMQIISQHSAPAPLPSPLPLLSASDATISSNLSGCSLFPVLHSVLQTNILQRESILNLMKQISANDTTADATCIPAQIAATEKSLLEAAHDREKELLHEITELQWRLICTQEELQKLKTDNAQV 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00024 699 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Adu04g00024 699 Pfam Protein kinase domain 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00024 699 MobiDBLite consensus disorder prediction 428 458 - -
Adu04g00024 699 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 698 - -
Adu04g00024 699 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
Adu04g00024 699 MobiDBLite consensus disorder prediction 475 518 - -
Adu04g00024 699 CDD STKc_OSR1_SPAK 22 285 - -
Adu04g00024 699 ProSiteProfiles Protein kinase domain profile. 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00024 699 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 698 - -
Adu04g00024 699 MobiDBLite consensus disorder prediction 378 400 - -
Adu04g00024 699 MobiDBLite consensus disorder prediction 378 395 - -
Adu04g00024 699 SMART serkin_6 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu04g00024 699 Gene3D Phosphorylase Kinase; domain 1 12 100 - -
Adu04g00024 699 Gene3D Transferase(Phosphotransferase) domain 1 105 337 - -
Adu04g00024 699 Coils Coil 675 699 - -
Adu04g00024 699 MobiDBLite consensus disorder prediction 500 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00024 Adu-Chr4 257993 265127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00024 13 681 MAP Kinase Kinase Kinase Kinase AT1G79640 63.450 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Adu04g00024 Pkinase 1.9e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00024 K08835 - gmx:100780339 1115.14