Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00002 atgTTCGTTCGTGGCAAATTTACGCACGTGCCTATAGTTGGAGACGGTGTCACCGGCCTTTCTATCTTTCTCTACGGGGAAATCTTCTCAGTCTTCGTCGGCGCGGTCGTACATGCTTTCGGGTTCCTTCTCCGGTTCAATATAGCGAATTTGAGGTTGTGTTCCGCTATTTGTACACGTTTTCGCCGGTTTAGAATTCTCACAGTTATAAGGGCAATAGAGGAGATGAAGCTACAGGCACATATTCCGGGTCAGATATCGGGTCAGGTACCTAATCAAGCAGGATCTCAGTTACCTGGACTGACCCAATTGAATGGGAATGTTCCTCCTCAGATGCCAATTATGGGTGGTGTTCCGCGTCCAACAATTAATATGGACCCTGAATTACTTAGAGCACGATCGTTTATTCAAGAGAAGATATATGATATGTTATTGCAACGACAACAGCATCCAGTTACAGAAGTACATAGAAGGAAAGTTAAGGATCTTGCAAAACGCTTGGAGGAGGGCATGTTAAAAGCTGCTCTCTCTAAGGAGGACTACATGAACTTGGAAACTCTAGAGAGTCGTTTATCTAATTTCCTAAGAAGAGCACACATGAATAATCACAACCAACAGTATCAACAGCTTGTTACCTCTGCTCCAATTGGTACAATGATACCAACTCCTGGTATGTCCCAAGTTCCTAATTCTAGCATGCTGGTTCCCTCTTCTATGGATGCTTCAGTGATTTCTACCAGTGGCTGCAATAGCATAGGATCAACATCTTTCAATGGTGTAAGCATGTTACCATCTGGTGGTATGCTTGGAAGTTCTGTAAATCGATCTGATGGTTTGTCCAATGGTTATCAGCAGTCTTCATCCAGCTTTTCTGTTGGGTCAGGGGGGAATATGTCAGCAATGGGGGTGCAGAGAATTGCTAGCCAAATGATTCCCACTCCTGGTTTTAGTGTCAGCAGTAATAATTCACACATGAATATAGATTCTTCCACTACTGGCAGTTCCTTTTCTGGTGTAGAGTCTACAATGGTATCGCAGCCATCACTGCAGCAGACGAAGCAGCATGGGCAAAATAGTCATGTTTTGCAGAACATTGGCAGCCAAATGGGTAGTGGAATGAGATCTGCTTTACTGCAAAAATCATTTGGGAACTCAAATGGTGCTGTAAATAGTGGACTTGGCTTGATTGGAAACAATATGCAACTTGCAAATGAACCTGGAACTACTGATGGTTATGCGCCAACCTACGTTAATTCCCCTAAACACTTACAGCAGCACTTCGATCAAAATCAGCAACCAGTTGTTCAGGGTGATGGATATGGATTGAATAATGTTGACACGTTCGCTTCTGGAAATTTTTATGCATCTGCAACAACCTCTGGGTCCATGATTAATGCTCAGAACACAAATTCAGTAAAATTGCCATCAATACCCAAAACTAGTTCATTGATAAGTGGTCACTCAAATTTGCATGGTATCCAGCAGGCTGCTCATATAAAGTCTCAAGCAATTAATCAACTGGAAAAGTTGAGTTTCCAGTCTTCATTGTCTTCACGAGATGGACTTCTGCATTCGCAACAGCAACATCAGCAAAGGCCCCAACAATATCAACAGCCAGACCAGTATGCACAGCAGCAATGCCAATTGAAGATGCAAAATCAGCAACCTCAGCATATGGTGAACAACGATACTTGCAGTCAGTCTCAACTGTCTTCTCATCTAGAGAACCGAGTGAAGCCTGAGCCGGGGGTTGAACACCATAAGGAAGTACTCAGCTCTCATGTTCCTGAACAGTTTCATTTGGCTGAGATGCAGAGTCATTTCCACCAGAACTCAGCTGAAGATTGCTCTAGGAGTGATCAACATCTTGCATATCCATCTGGTGTACATGACTTAGCCTCGTCAACACCTCAAAATTCACAACAAATGTTGCACATGCACCAATTGGTTGCAGAGCCTCAGAATAATCTTAACTGTCTTACGGTTGGGCTGCAATCCAAATCTTTAGTTCTAAATCAATGGCCTCAGTCACAAGATAGTAACCATATGCCTGCGAATATTTCACATGAGCAGCATGTCCACAGGGATTTCCACCAAAGAATATCAGTGCAGGGTGAAGCTCAGTGCAATAATTTATCTTCAGATGGATCGATTATTGGTCAAGCAGTTGCTCCTAGAGCTTCAGTTGATCTGATAGACTCTGGAAGTGGGGTCAAAAAGGAACACAGGAATCAGCAGAGGTGGCTTTTATTTCTACTTCATGCCCGACGGTGTCCTGCCCCTGAAGGACAGTGCCCAGAACGCTTTTGTTCTAATGCACAGAAGTTATGTAAGCACATAGATGGTTGTAACAAGGTTCATTGTTCATATGCTCGGTGTCATCATACCAGGCTTTTGATTCGTCATTACATGAACTGCAAGGATCCTTGTTGCCCTGTTTGTGTTTTCGTAAGAAATTATCGACGTGCAGTGCAACTTAAGTCTCAGATTCGGTCAGAGCATGAATCAAGTTTGCCAATTACAGCAAACGGGTCCTGTAAAACATATAATACTGTGGCCCCGTTGGCTAGATTGATCTCAAAGCCTCCATTAGCTGCTGAAACTTCAGAAGATCTACATCCATCTCTAAAACGTATAAAGACTGAGCATTGCACCATGCAATCCATGAATCCTGAAAATGACAATTCTTCATCCATTTCTGCAAATTGTGAATCTCTTATTTCCAGGGATGCACAGTCCCTGGCCTATCCAAATGCTGAGAAATCTATCTCAATTAAGTCTGAGATTGCTGAAGTTAAGGCTGAAGCTTCAGCACATTTGGTACATGAAAAGCTTAGTGAGATGAAAATGGATAGCAATCGTTCAGATAATAAAACGTTGGGTGGTGAACCTGCCAAATATGATGAACCTGCTAATTTATGTAGGTCAGAACATGTTAAAACTGAGAAAGAAAGTGCACAAGATAAGCAAGAAAATGTGATGCAGCCATCTGAAAATGCAGCTGGAACCAAGTCTGGCAAGCCAAAAATAAAGGGTGTCTCGTTAACTGAACTATTTACGCCTGAGCAAGTCAGGGAACATATCACTGGCCTAAGGCAATGGGTTGGTCAAAGCAAATCAAAAGCAGAGAAGAACCAAGCAATGGAGCATTCGATGAGTGAGAATTCTTGTCAGTTGTGTGCTGTAGAGAAGCTTACTTTTGAACCCCCACCAATCTATTGTACAACCTGTGGTGTTCGTATTAAACGAAACAATATGTATTATACCACGGGGGCTGGTGATACACGGCATTATTTTTGTATTCCATGCTATAATGATGCTCGTTCAGAGAACATTAACGTTGACGGGACTCCAATTCCGAAGTCAAGATTGGAAAAGAAGAAGAATGATGAAGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCCTGGCAACATCAAATTTGTGCCTTATTTAACGGAAGAAGAAATGACGGTGGACAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCAAGCCTTTACCCCAAAGTGCTGTTCTTGGAGCCAAAGATTTGCCGCGAACCATTCTCAGTGACCACATAGAACAGCGATTATTTAAAAGACTAAAGCAAGAAAGGCAGGAGAGGGCAAGGCTTCATGGAAAATCTTATGAAGAGGTTCCAGGAGCTGAATCGCTTGTTATAAGAGTTGTGTCATCTGTTGACAAGAAGTTAGAAGTGAAACAGCGATTTTTGGAGATTTTTCAGGAAGAAAATTATCCAACAGAATTCCCATATAAATCCAAGGTAATTTTGCTGTTTCAAAAGATTGAAGGTGTGGAAGTCTGCCTATTTGGCATGTATGTCCAAGAATTTGGATCTGAATGTCAGTTGCCCAACCAGCGCCGAGTGTATCTTTCATATCTTGACTCTGTGAAGTATTTTAGGCCTGAGGTTAAGGCCGTAACTGGAGAGGCTCTTCGGACATTTGTTTACCATGAAATTCTGATTGGATACCTTGAATATTGCAAGAAACGTGGTTTTACAAGCTGCTATATATGGGCATGTCCACCATTGAAGGGTGAAGACTATATTTTATATTGCCATCCAGAAATTCAGAAAACACCAAAATCTGATAAGCTTAGGGAATGGTATCTGTCCATGCTGAGAAAAGCTATCAAGGAGAATATTGTGGTTGATCTCACCAACTTATATGATCATTTCTTTGTATCTACTGGTGAATCTAGGGCTAAGGTTACAGCTGCCAGACTCCCATATTTTGATGGTGACTACTGGCCTGGGGCTGCTGAGGATTTGATTTATCAGCTTCGCCAAGAGGAAGATGGAAGGAAACAAAATAAGAAAGGAACAACTAAAAAAACTATAACAAAAAGGGCCTTAAAAGCATCTGGTCAGTCAGATCTCTCTGGCAATGCCTCGAAAGATCTGCTTCTCATGCACAAACTTGGTGAAACCATTTGCCCAATGAAGGAGGATTTTATCATGGTTCATCTACAGCATGCATGCAGTCATTGTTGTATTCTAATGGTGTCTGGCAACCGTTGGGTTTGCAACCAGTGCAAGAATTTTCAGATTTGTGATAGGTGCTATGAAGTGGAATTAAAACGTGAAGAGAGAGAAAGGCATCCTATTAATCAGAGGGAGAAACATACCCTTTATCCAATTGAAATCAATGATGTTCCAGTTGATACAAAGGACAAAGATGATATTCTCGAGAGTGAATTCTTTGATACTAGACAAGCATTTCTCAGTCTCTGCCAGGGAAATCATTATCAATATGATACACTTAGGCGAGCCAAGCATTCATCAATGATGGTTCTATATCATCTTCATAATCCAACCGCTCCTGCATTTGTGACTACCTGTAATATATGCTATCTCGACATAGAAACTGGCCAAGGGTGGCGCTGTGAGGTTTGCCCCGAGTATGATGTATGTAATGCTTGTTATCAAAAGGATGGAGGCATTGACCATCCCCATAAGTTGACAAATCATCCATCAATGGCAGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGCTTCGAGTATTGCAGCTACGGAAAATGCTTGATCTACTTGTGCATGCATCCCAATGTCGTTCCGCACATTGCCAATATCCAAATTGCCGCAAAGTAAAGGGGCTTTTCCGCCACGGGATGCACTGCAAAACACGAGCTTCTGGAGGTTGTGTTCTTTGTAAGAAAATGTGGTATTTGCTTCAACTCCATGCTCGTGCTTGCAAGGAATCGGAATGCCACGTGCCGCGTTGCAGGGATTTGAAAGAGCATTTAAGGAGATTGCAGCAACAGTCTGATTCACGGCGTAGGGCTGCTGTAATGGAGATGATGAGGCAAAGAGCTGCAGAAGTTGCCAACAACGCTGGATGA 5418 0.4236 MFVRGKFTHVPIVGDGVTGLSIFLYGEIFSVFVGAVVHAFGFLLRFNIANLRLCSAICTRFRRFRILTVIRAIEEMKLQAHIPGQISGQVPNQAGSQLPGLTQLNGNVPPQMPIMGGVPRPTINMDPELLRARSFIQEKIYDMLLQRQQHPVTEVHRRKVKDLAKRLEEGMLKAALSKEDYMNLETLESRLSNFLRRAHMNNHNQQYQQLVTSAPIGTMIPTPGMSQVPNSSMLVPSSMDASVISTSGCNSIGSTSFNGVSMLPSGGMLGSSVNRSDGLSNGYQQSSSSFSVGSGGNMSAMGVQRIASQMIPTPGFSVSSNNSHMNIDSSTTGSSFSGVESTMVSQPSLQQTKQHGQNSHVLQNIGSQMGSGMRSALLQKSFGNSNGAVNSGLGLIGNNMQLANEPGTTDGYAPTYVNSPKHLQQHFDQNQQPVVQGDGYGLNNVDTFASGNFYASATTSGSMINAQNTNSVKLPSIPKTSSLISGHSNLHGIQQAAHIKSQAINQLEKLSFQSSLSSRDGLLHSQQQHQQRPQQYQQPDQYAQQQCQLKMQNQQPQHMVNNDTCSQSQLSSHLENRVKPEPGVEHHKEVLSSHVPEQFHLAEMQSHFHQNSAEDCSRSDQHLAYPSGVHDLASSTPQNSQQMLHMHQLVAEPQNNLNCLTVGLQSKSLVLNQWPQSQDSNHMPANISHEQHVHRDFHQRISVQGEAQCNNLSSDGSIIGQAVAPRASVDLIDSGSGVKKEHRNQQRWLLFLLHARRCPAPEGQCPERFCSNAQKLCKHIDGCNKVHCSYARCHHTRLLIRHYMNCKDPCCPVCVFVRNYRRAVQLKSQIRSEHESSLPITANGSCKTYNTVAPLARLISKPPLAAETSEDLHPSLKRIKTEHCTMQSMNPENDNSSSISANCESLISRDAQSLAYPNAEKSISIKSEIAEVKAEASAHLVHEKLSEMKMDSNRSDNKTLGGEPAKYDEPANLCRSEHVKTEKESAQDKQENVMQPSENAAGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTTGAGDTRHYFCIPCYNDARSENINVDGTPIPKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFKRLKQERQERARLHGKSYEEVPGAESLVIRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQLPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAIKENIVVDLTNLYDHFFVSTGESRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETICPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDRCYEVELKREERERHPINQREKHTLYPIEINDVPVDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKDGGIDHPHKLTNHPSMADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00002 1805 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1124 1172 IPR013083 -
Adu04g00002 1805 Pfam PHD-finger 1130 1172 IPR019787 -
Adu04g00002 1805 SUPERFAMILY TAZ domain 742 821 IPR035898 -
Adu04g00002 1805 MobiDBLite consensus disorder prediction 944 1008 - -
Adu04g00002 1805 SMART TAZ_2 740 817 IPR000197 -
Adu04g00002 1805 SMART TAZ_2 1690 1768 IPR000197 -
Adu04g00002 1805 ProSiteProfiles Zinc finger ZZ-type profile. 1627 1680 IPR000433 GO:0008270
Adu04g00002 1805 MobiDBLite consensus disorder prediction 1453 1477 - -
Adu04g00002 1805 SUPERFAMILY FYVE/PHD zinc finger 1133 1173 IPR011011 -
Adu04g00002 1805 Gene3D - 1503 1563 IPR043145 -
Adu04g00002 1805 ProSiteProfiles Zinc finger TAZ-type profile. 736 817 IPR000197 -
Adu04g00002 1805 SMART zz_5 1626 1672 IPR000433 GO:0008270
Adu04g00002 1805 SMART zz_5 1506 1550 IPR000433 GO:0008270
Adu04g00002 1805 SUPERFAMILY RING/U-box 1608 1676 - -
Adu04g00002 1805 Pfam Histone acetylation protein 1229 1449 IPR013178 GO:0004402|GO:0006355|GO:0016573
Adu04g00002 1805 SMART KAT11_2 1222 1519 IPR013178 GO:0004402|GO:0006355|GO:0016573
Adu04g00002 1805 MobiDBLite consensus disorder prediction 518 570 - -
Adu04g00002 1805 ProSiteProfiles Zinc finger ZZ-type profile. 1507 1570 IPR000433 GO:0008270
Adu04g00002 1805 PANTHER ZINC FINGER, TAZ-TYPE-RELATED 216 1804 - -
Adu04g00002 1805 Pfam TAZ zinc finger 1697 1767 IPR000197 -
Adu04g00002 1805 Pfam TAZ zinc finger 746 814 IPR000197 -
Adu04g00002 1805 Gene3D - 1626 1678 IPR043145 -
Adu04g00002 1805 PANTHER CBP/P300-RELATED 216 1804 IPR013178 GO:0004402|GO:0006355|GO:0016573
Adu04g00002 1805 MobiDBLite consensus disorder prediction 970 989 - -
Adu04g00002 1805 CDD PHD_HAC_like 1099 1171 - -
Adu04g00002 1805 ProSitePatterns Zinc finger ZZ-type signature. 1632 1659 IPR000433 GO:0008270
Adu04g00002 1805 Pfam Zinc finger, ZZ type 1629 1668 IPR000433 GO:0008270
Adu04g00002 1805 ProSitePatterns Zinc finger PHD-type signature. 1100 1171 IPR019786 -
Adu04g00002 1805 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1189 1625 IPR031162 GO:0004402
Adu04g00002 1805 ProSiteProfiles Zinc finger TAZ-type profile. 1687 1770 IPR000197 -
Adu04g00002 1805 Gene3D TAZ domain 734 822 IPR035898 -
Adu04g00002 1805 SUPERFAMILY TAZ domain 1689 1772 IPR035898 -
Adu04g00002 1805 Gene3D TAZ domain 1684 1801 IPR035898 -
Adu04g00002 1805 SUPERFAMILY RING/U-box 1487 1560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00002 Adu-Chr4 65743 77227 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Adu04g00002 HAT_KAT11 1.7e-33 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00002 K04498 - gmx:100809207 2972.19