Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04689 ATGGGTGAGTATTCATCAAGAAGCGGTGATGTTGCTATCTCTGTAACTAGTAAGGAGGAAGCAGGAGGAGGTGGGACCTGCAAAACAGGCAAATATTTTCTTCTGTTTCAGAAGATGGTGGCGGAGTTGGTGGGGACGTATTTCTTGATATTTACAGGGTGCGCAGCGATTGCGGTGAACAACGACTACGGGAAGCAAATAACGCTTCTTGGAATTGCAACTGTTTGGGGATTGGTTGTCATGGTCATCGTTTACTCCGTTGGTCATGTCTCTGGGGCCCATCTCAACCCTGCCGTCACTATTGCTTTTGCCTCCATCACAAAGTTTCCACTCACTCAGGTACCGGCTTATATAGCAGCTGAATTGCTTGGAGCGATCCTAGCAAGCGGAACAGTGAGACTAGTATTTAGTGGGAACCACGTTGAAGTTCAGTTCACAGGAACGTTGCCGAGTGGCTCAAACATCCAATCCTTCGTCCTTGAATTCATTATCACTTTTTTCCTTATGTTTGTCATTTGCGCCGTTGCTACCGATAGCAGAGCGGTTGGTACCTTGGCTGGAGTTGCAATCGGGTCTACCATACTAATTAATGTGCTGATTGCAGCGCAAGTGTCAGGAGCATCAATGAACCCAGCAAGGAGTCTAGGACCTGCATTTGTGCACCATGAATACAGAGGAATATGGATATACTTGTTGTCACCCACCATTGGAGCTGTGGCGGCTGCATGGGTCTACAACATACTTAGGGAGAAGAAGGACAAGCCCATCATTCAGATCACCAAGAATGCCTCTTTCAACTGA 801 0.4719 MGEYSSRSGDVAISVTSKEEAGGGGTCKTGKYFLLFQKMVAELVGTYFLIFTGCAAIAVNNDYGKQITLLGIATVWGLVVMVIVYSVGHVSGAHLNPAVTIAFASITKFPLTQVPAYIAAELLGAILASGTVRLVFSGNHVEVQFTGTLPSGSNIQSFVLEFIITFFLMFVICAVATDSRAVGTLAGVAIGSTILINVLIAAQVSGASMNPARSLGPAFVHHEYRGIWIYLLSPTIGAVAAAWVYNILREKKDKPIIQITKNASFN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04689 266 CDD MIP 37 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu03g04689 266 PANTHER AQUAPORIN NIP2-1 25 265 IPR034294 -
Adu03g04689 266 Gene3D Glycerol uptake facilitator protein. 10 257 IPR023271 -
Adu03g04689 266 Pfam Major intrinsic protein 36 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu03g04689 266 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Adu03g04689 266 PANTHER NODULIN-26 25 265 - -
Adu03g04689 266 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu03g04689 266 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu03g04689 266 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu03g04689 266 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu03g04689 266 PRINTS Major intrinsic protein family signature 191 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu03g04689 266 PRINTS Major intrinsic protein family signature 228 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu03g04689 266 SUPERFAMILY Aquaporin-like 33 251 IPR023271 -
Adu03g04689 266 TIGRFAM MIP: MIP family channel proteins 41 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04689 Adu-Chr3 136120560 136124455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04689 18 265 Major Intrinsic Protein MIP AT5G37820 53.600 2.69e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04689 K09874 - gmx:547904 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04689 03 136120560 136124455 Adu10g00102 10 1066697 1068411 PCT