Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04687 ATGGATGAAGCTCAGAGCAGTTCCAATTCCCTACCACCTTTTCTGGCAAAGACTTATGAGATGGTGGATGATCCTTCCACTGATCCCATTGTTTCTTGGAGTGCCTCTAATAGAAGTTTCGTTGTGTGGAATCCTCCGGATTTTGCTAGGGATTTGCTGCCTAGATTCTTCAAGCACAATAACTTCTCAAGCTTTATCAGGCAGCTGAACACTTATGGTTTTAAGAAGGTTGATCCTGAACAATGGGAATTTGCAAATGATGATTTTGTAAGAGGTCAACCACATCGCATGAAGAATATCCACAGACGAAAACCAGTTCATAGTCATTCTTTACAGAATCTTCAGGCGCAAGCTCCACTGACAGAATCAGAAAGGATGAGTTTACAAGATGAAATAGAGAGGCTTAACCGTGAAAAAGAACAGCTTCTTATGGAGCTACAGAGACATGAACAGGAGTGGCAAGAATATGAGATTCGAATACACTGCTCGAAAGACCGTGTGGAGAAGATGGAGCAGAAGCATCAAAAGATGATCTCTTCTGTTTCCAGTGTACTGCAGAAACCTGGAATTGACTTGAATCAATTGGCATTGCTAGAAACCACAGATAGAAAACGAAGGTTACCAAGAAGTGGCTATCTTAGTGATGAAACTAACATTGAAGATACAACTGAGACCGAACAAATGTTACCCACAGAAAATTCACAGGACACCTCCGTTTTGACAATAATCACAGAGCAGTTGGATCAGCTCGAGTCATCCATGGTATTTTGGGAAACCATTTCAAATGATATTTCTGACACGACCATTCACATTCATTCAAGCTTGGATTTTGATGAATCTACAAGTTGTGCTGATAGTCTGTCTATATCTTGCCCCCTACTAGATATTGAAGTTCTGCCTAAGTCATCTGGAATTGACATGAACTCTGAGCCTGCTTCTGCTCCTGTTTCCGAGCCTGCTTCCGCATCAAAAGAACAAGCTGCCGGCACAACCCCTGTGGTGGTTGGTGTTAATGATGTATTTTGGGAACAATTCTTGACAGAGAATCCTGGTTCATCAGAAGCACAGGAAGTACAATCAGAAAGAAAGTATCATGATACTAGCAAGGGTGAAGGAAAACCTAGTGACCCAGGAAAGTTTTGGTGGAACATGCGAAATACAAGTAATCTTCCAGAACAAATAGGTCATGTTAGTCAAGCAGAAAAAACATAG 1212 0.4142 MDEAQSSSNSLPPFLAKTYEMVDDPSTDPIVSWSASNRSFVVWNPPDFARDLLPRFFKHNNFSSFIRQLNTYGFKKVDPEQWEFANDDFVRGQPHRMKNIHRRKPVHSHSLQNLQAQAPLTESERMSLQDEIERLNREKEQLLMELQRHEQEWQEYEIRIHCSKDRVEKMEQKHQKMISSVSSVLQKPGIDLNQLALLETTDRKRRLPRSGYLSDETNIEDTTETEQMLPTENSQDTSVLTIITEQLDQLESSMVFWETISNDISDTTIHIHSSLDFDESTSCADSLSISCPLLDIEVLPKSSGIDMNSEPASAPVSEPASASKEQAAGTTPVVVGVNDVFWEQFLTENPGSSEAQEVQSERKYHDTSKGEGKPSDPGKFWWNMRNTSNLPEQIGHVSQAEKT 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04687 403 Coils Coil 111 159 - -
Adu03g04687 403 Gene3D - 6 104 IPR036388 -
Adu03g04687 403 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 384 IPR027725 -
Adu03g04687 403 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu03g04687 403 MobiDBLite consensus disorder prediction 348 403 - -
Adu03g04687 403 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu03g04687 403 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu03g04687 403 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu03g04687 403 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-4C 1 384 - -
Adu03g04687 403 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu03g04687 403 SUPERFAMILY "Winged helix" DNA-binding domain 9 103 IPR036390 -
Adu03g04687 403 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu03g04687 403 MobiDBLite consensus disorder prediction 306 328 - -
Adu03g04687 403 MobiDBLite consensus disorder prediction 381 403 - -
Adu03g04687 403 MobiDBLite consensus disorder prediction 305 329 - -
Adu03g04687 403 MobiDBLite consensus disorder prediction 358 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04687 Adu-Chr3 136082340 136085341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04687 7 403 HSF AT4G18880 52.451 1.48e-120 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Adu03g04687 HSF_DNA-bind 9.7e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04687 K09419 - gmx:100817602 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04687 03 136082340 136085341 Adu03g04687 03 136082340 136085341 ECH
Adu10g00107 10 1092779 1094828 Adu03g04687 03 136082340 136085341 ECH
Adu03g04687 03 136082340 136085341 Adu10g00107 10 1092779 1094828 PCT