Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04686 ATGAAGTGGGGTGGAAGAAAATCATCACCAGCTTCTTCTTCTAATAGTATTAATAATAATACTAAGCATTCTTTCATCTCTCAAGTGTCTCCTTTTTCATGGCTGTCCAAGTTCAAGCAGATGAGGATTAACTCGGAGCGAAAGCCGGGGCAGAATGCAAAGCAGAATTCTGTTCCATCTTATGGTTCAGCACCAAAGGATGCATGTGGGAATAGAGGTAGGTTTTATGGAGGGGAAGATGATGCCTTCTGGAGACTCTCATTTGGTGAAGAGAGTCATGAGCATAACAAGAGTAGTGAAGATATCTTGAAATCAACACTGCACAATTTGGATGGTGATCATGCCAATGATGTCATTCAGTCCTCAGCACAATTTGGACTGAGTGATAAAAGACATGGAAGAAGAGAAGCTAGTCTGAGGTTGAAGCAGAAGGATATTGGAATGGGAGAGGAAAGAAAGTTGCCATGTGAGAATGAGTGTGATCATGGAGGAAAGGAATTTGAATTCTTAAGGAGGAGATATGAAAGGAAAGCACAAAAGGTTTTTCAAGATCAACTCTTGAAACTAGAAAAAGCTGCAGATAATCTAGAATCTGAATTTGCATCTAGCAACTCTAAGTCCTTGGAAAATGATGTGCTGAAATCCGAATCGCCTAGAACGATTCGAACACCAAGAACAAATTCGTACATCTCTGTAAATTCAAAGAATTCTGGCGATGGAAATATTAAAGAAGGTGGTGTTAACTCTGGGAAGAATACTGAAGAGTTGAGAGTGAAGGTTAACAAGAAAAGGCAATCACTTCATGTAGGCAAAGAACTTCAGAGGAGGAAGCCAAGGAATAGTCCAAGGGTAAGAGTGCATTCTCCGAGGATGGCTTCCAAGGTCGAAATCTGCAAAATAAAGGCCATAGAAGACATGAAGAAAGCAAAACTAAAGATGAAGAAAGAGGAGGAAATTTCAGAGGAAACGGCAGGTGTAGACAGCTTTGCTGTGGTGAAATGCTCAATGGATCCGCAACAAGACTTCAGAGATTCGATGATGGAGATGATCGTGCAGAGGAAGATCAGCAGGCCAGAAGAAATGGAGGAGCTGTTGGCATGTTATCTCACACTGAATTCTAGTGAGTATCATGATATCATCATCAAGGTTTTCAGGGAGGTGTGGTTATATGTGAACAAGGTTTGTTGTCTTAAATCAGAAGCAATGCAGTTGCAATGA 1218 0.4089 MKWGGRKSSPASSSNSINNNTKHSFISQVSPFSWLSKFKQMRINSERKPGQNAKQNSVPSYGSAPKDACGNRGRFYGGEDDAFWRLSFGEESHEHNKSSEDILKSTLHNLDGDHANDVIQSSAQFGLSDKRHGRREASLRLKQKDIGMGEERKLPCENECDHGGKEFEFLRRRYERKAQKVFQDQLLKLEKAADNLESEFASSNSKSLENDVLKSESPRTIRTPRTNSYISVNSKNSGDGNIKEGGVNSGKNTEELRVKVNKKRQSLHVGKELQRRKPRNSPRVRVHSPRMASKVEICKIKAIEDMKKAKLKMKKEEEISEETAGVDSFAVVKCSMDPQQDFRDSMMEMIVQRKISRPEEMEELLACYLTLNSSEYHDIIIKVFREVWLYVNKVCCLKSEAMQLQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04686 405 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 393 IPR038933 GO:0045892
Adu03g04686 405 MobiDBLite consensus disorder prediction 255 279 - -
Adu03g04686 405 MobiDBLite consensus disorder prediction 41 73 - -
Adu03g04686 405 Coils Coil 179 206 - -
Adu03g04686 405 MobiDBLite consensus disorder prediction 229 288 - -
Adu03g04686 405 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 329 390 IPR006458 -
Adu03g04686 405 MobiDBLite consensus disorder prediction 7 22 - -
Adu03g04686 405 Pfam Transcriptional repressor, ovate 335 389 IPR006458 -
Adu03g04686 405 ProSiteProfiles OVATE domain profile. 331 390 IPR006458 -
Adu03g04686 405 MobiDBLite consensus disorder prediction 1 22 - -
Adu03g04686 405 PANTHER TRANSCRIPTION REPRESSOR OFP4 9 393 - -
Adu03g04686 405 MobiDBLite consensus disorder prediction 41 62 - -
Adu03g04686 405 MobiDBLite consensus disorder prediction 229 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04686 Adu-Chr3 136079025 136080318 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Adu03g04686 Ovate 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04686 - - ahf:112792751 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04686 03 136079025 136080318 Adu03g04686 03 136079025 136080318 ECH
Adu03g04686 03 136079025 136080318 Adu10g00108 10 1096840 1098072 PCT