Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04674 ATGGATAGTAAGTTGAGGAACAGGAGTAGTAGGAGTAGCAGAAATCTGTATATGAAGGAACAAGAAGACAATGATGGTTCGGACTCCCCTCCTTCAAATTCCACCCTCTTCAACATTGATGCCTTGGTTACTTCTTCTCCATCATCTTCAAGTAAGAGAAGGCGAGGCGTAGAAAAAAGGGTGGTGCATATAAGAATAAAGGAGGGAGAAGGACCGAGGCTAAAAGGGGAAAACAACACTCCACCACCCTCAGATTCATGGGCATGGAGGAAGTACGGCCAGAAACCCATAAAAGGTTCCCCTTACCCGAGAGGATACTACAGATGTAGCAGCTCAAAGGGGTGTCCGGCGAGAAAGCAAGTAGAGAGAAGCCGAGTGGACCCCACCATGCTGGTAGTTACATATTCATGCGAACACAACCATCCATGGCCTTCTTCACGGAACCACAATAGATCGTCTACTAAGAAGCCCCAGCCCTCCGCCGAGGACCTACTTGTGGACCCGGTCGAACCGGATCTTGAGGGCCACGACTCCATCATTCATGACCTTGGCTGGTTCCGTGATATCTCGGGGGCTCTCACCCCGTCTTTGCCCGCCGTACTGGACAGCCCCATATTCTCTGGCTACGACGATGCGGATGTGGCGGCCTCGGTGGTGCTGCCCATGGGGGACGACGAGGAGTCGCTCTTTGCGGACCAGGATAGGAAAAAAAAAAAAAGAAAATAG 726 0.5124 MDSKLRNRSSRSSRNLYMKEQEDNDGSDSPPSNSTLFNIDALVTSSPSSSSKRRRGVEKRVVHIRIKEGEGPRLKGENNTPPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTMLVVTYSCEHNHPWPSSRNHNRSSTKKPQPSAEDLLVDPVEPDLEGHDSIIHDLGWFRDISGALTPSLPAVLDSPIFSGYDDADVAASVVLPMGDDEESLFADQDRKKKKRK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04674 241 ProSiteProfiles WRKY domain profile. 84 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu03g04674 241 MobiDBLite consensus disorder prediction 139 159 - -
Adu03g04674 241 SUPERFAMILY WRKY DNA-binding domain 80 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu03g04674 241 MobiDBLite consensus disorder prediction 27 51 - -
Adu03g04674 241 SMART WRKY_cls 83 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu03g04674 241 MobiDBLite consensus disorder prediction 1 105 - -
Adu03g04674 241 MobiDBLite consensus disorder prediction 1 26 - -
Adu03g04674 241 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 18 232 IPR044810 GO:0003700
Adu03g04674 241 MobiDBLite consensus disorder prediction 138 164 - -
Adu03g04674 241 Gene3D WRKY domain 72 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu03g04674 241 PANTHER OS01G0750100 PROTEIN 18 232 - -
Adu03g04674 241 Pfam WRKY DNA -binding domain 85 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04674 Adu-Chr3 135983617 135985071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04674 20 232 WRKY Transcription Factor Family AT1G29280 47.826 5.43e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu03g04674 WRKY 2.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04674 - - ahf:112734976 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04674 03 135983617 135985071 Adu03g04674 03 135983617 135985071 ECH