Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04665 ATGGATCAGGCAAGAAGTGAAGACAGTGCTGAGGTGTTGGATAATGTAGTTGGAGAAGGAGTTGCAACTGATGCAGGAGATGGTAGTGAATTGGTTGAGAGAGATGATGTAGTTGGAGAAAATGGAACTTCAGATCTGGGTTTGAATACGGAGCTAGAGGAGGAGGAGGAGACTCGAGTGGTTAAGGATCAGGAAACAGCTGAGTTGCAAAAAATCAGTGATACATTGTGTGGGGTTGAGCAAGGAACTAGTTATAGCTCAAGAAATTTGGTCAGTAGGGAGGATGTACTTGAGACCTGTGTTGTAATAGATCCTCCTGCTCAGATCGAGCATGTCCAGGGAAAATCGAAAGCAAAAGCCAATGAATCAGGGTTGAGCAAGCTAGCCATGAAAGCACCAAAGGCAGTGTCTGAGACAGATAAAAATTCATGTGCAATTGATATAAACAAAGAGTTTAGTGAGAACTTGGAAGGTGAAATGATTTGTAGAATTTGTCATCTGGCATCAGGGCAACCAATAGAAGCAATGATGGTTGGGACTGCTAACAATGAAACTAGTACAGATTTGATTCAACTTGGTTGTGCATGTAAGGATGAGCTAGGCATTGCACACAGTCATTGTGCTGAGGCATGGTTCAAGCTTAAAGGAAACAGGTTGTGTGAAATATGTGGTGAGACTGCAAAAAATGTTTCAGAATCACAGGTTATCAATCATTCATTTATGGAAGAGTGGAACGAAAGTAGGTTCATCGACGGTGGTAATAGTACCTCAACCGGCTTCTTTGGAAGATGTTGGCGTGGACAGCCATTCTGTAACTTTTTGATGGCATGCTTGGTAATAGCTTTCGTTCTACCATGGTTCTTCCGTGTAAATATGTTCTAG 882 0.4218 MDQARSEDSAEVLDNVVGEGVATDAGDGSELVERDDVVGENGTSDLGLNTELEEEEETRVVKDQETAELQKISDTLCGVEQGTSYSSRNLVSREDVLETCVVIDPPAQIEHVQGKSKAKANESGLSKLAMKAPKAVSETDKNSCAIDINKEFSENLEGEMICRICHLASGQPIEAMMVGTANNETSTDLIQLGCACKDELGIAHSHCAEAWFKLKGNRLCEICGETAKNVSESQVINHSFMEEWNESRFIDGGNSTSTGFFGRCWRGQPFCNFLMACLVIAFVLPWFFRVNMF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04665 293 PANTHER ZINC FINGER, RING-CH-TYPE 1 293 - -
Adu03g04665 293 ProSiteProfiles Zinc finger RING-CH-type profile. 154 230 IPR011016 GO:0008270
Adu03g04665 293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 235 IPR013083 -
Adu03g04665 293 MobiDBLite consensus disorder prediction 1 65 - -
Adu03g04665 293 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 1 293 - -
Adu03g04665 293 SUPERFAMILY RING/U-box 159 226 - -
Adu03g04665 293 Pfam RING-variant domain 181 223 IPR011016 GO:0008270
Adu03g04665 293 SMART ringv_2 161 224 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04665 Adu-Chr3 135885439 135887767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04665 157 292 C3H Transcription Factor Family AT5G05830 41.429 1.84e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04665 - - gmx:100791129 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04665 03 135885439 135887767 Adu03g04665 03 135885439 135887767 ECH
Adu03g04665 03 135885439 135887767 Adu10g00147 10 2129330 2131748 PCT