Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04635 ATGAAAAACAAGTCAAAGTTTGTTGGGGTGAGGCAAAGAGCTTCTGGAAAATGGGCAGCAGAGATCAAAGATACATCAAAGCAGATAAGGATTTGGCTTGGAACCTATCAAACTGCTGAGGAAGCTGCTAGAGCCTATGATGAAGCAGCTTTTCTCCTTAGAGGTTCCAACACTCGCACCAACTTCAACACTCGTCACACTATTGCTCCCAATTCTCCTATATCTCTCAAAATCAGAAATCTGCTCGATCGTAGAACCATCTCAACTCGAATTCAAAAGCAACTCCCTATGGTTAGTCCCAATGTTCAAGATGCCAAGCAAGAAAACCATGCATGTAGATATAGTGGTAGTAGTGAAGGTGAGTCTTTGTTTTGGGTGCAGAACCAAGTTTCTGACAATGTTTATAGGCCAGAATTGAATATGATGACCTGTGCAACGGGTCCGGTTGAACTAAATGAGTATCAGTTTGATTATTCATGGGCATTAGCTCAACAAAGGATTAATGAATTACCAATATTATCACCAGAAAGTGGATTCAATGAAGAAAGGAAACTGTCAGATTCACTTTTTGCCATGAATGAGGATGAACATGGGAATGAGTATGAGTGTGATGTCAGTTATCCTCTCTCCCACTTGTTCTGCTTTAATTGA 651 0.4055 MKNKSKFVGVRQRASGKWAAEIKDTSKQIRIWLGTYQTAEEAARAYDEAAFLLRGSNTRTNFNTRHTIAPNSPISLKIRNLLDRRTISTRIQKQLPMVSPNVQDAKQENHACRYSGSSEGESLFWVQNQVSDNVYRPELNMMTCATGPVELNEYQFDYSWALAQQRINELPILSPESGFNEERKLSDSLFAMNEDEHGNEYECDVSYPLSHLFCFN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04635 216 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 2 170 - -
Adu03g04635 216 SUPERFAMILY DNA-binding domain 5 64 IPR016177 GO:0003677
Adu03g04635 216 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Adu03g04635 216 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Adu03g04635 216 CDD AP2 5 62 IPR001471 GO:0003700|GO:0006355
Adu03g04635 216 Pfam AP2 domain 5 55 IPR001471 GO:0003700|GO:0006355
Adu03g04635 216 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-11 2 170 - -
Adu03g04635 216 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Adu03g04635 216 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Adu03g04635 216 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04635 Adu-Chr3 135624697 135625347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04635 3 214 AP2-EREBP Transcription Factor Family AT5G19790 40.249 2.85e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu03g04635 AP2 2.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04635 K09286 - gmx:100803832 234.572