Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04604 ATGGAGTGCAGGAGCATCCAAAGCATGGCATCAAGTAGCACAAGACCCAAAtatgacgtgtttgtgagcttcagaggtgaggacgtacgcaacaccttcgctgatcatctctttgccgctttccgtagaaacggaatagttgcatttagagacgataggaatctgatgcaaggacagcacatctccactgagctggtgcaagcaattgaaggatctcagcaatacgataacagaaccaaatctgttgcctattttctacgattcgccaatctctctggttgggatatacaaaataaGCAGGAGAATGGAGAGATTGAAAAAATTGTTAAGAGGGTGAGAAGCAAATTAGGTTGCAATTCGTTAAGTGTGGATGGGTTGGTTGGGATGCAATCTCGTGTGGAGGAATTGGAAAACCTGATTGATTTCAACTCCGATAATGAAGTTCGGGTTGTAGGCGTTTGTGGCATGGGTGGGATAGGAAAGTCAACACTTGCTAGGGTCGTGTATGGTAGAAACCTTCATAAATTTGGTGCTCATTGTTTTGTTGATGATATAAGCAAAGTTTTTCGTGATGCGGGTGGTCTATCTTCTCTACAAAAGCAACTTGTTTGTCAAATTACAAATGGAGAGATCCAAGATATATACAATCATTACGAAGCTAAGAGTTTGATGAAAACTATGCTACGTTGTCAAAAGGCTCTGATTGTTCTAGATAATGCCGAAGAAGTTGAACAGTTAGAGAAGCTTGGCGTGACTCGTGATTGTCTATGTCCAGGAAGCAGAATTGTAGTAACTTCTAGAGATCAACATGTCTTGAACTCTTTTGGGCTAGATCAAACATACAAAGTTCAACTCTTGAATGACGATGAAGCTCATCAATTGTTTTGTGAAAAAGCTTTTGATGATAATATAATTATGAGTTGTGACGAGATTAGCAGAGAGTACAAAAAGTTGACGGATCTTGCACTTAAATATGCTCAAggccttcccttggcagttaaaggcatgagaatagttcggcaaagtgctccaaatgagccatggaagtggagtaggatatggtgcaaagaggatTTTCAACGTATTATGTTTGGAAATACGGTAATTGATGATGTTAAGGCCGTTCAATTGAGGGGATTATATGATGAAGAAAGAAATATGACATTAAGAGCAGAAACATTATCAAGAATGAGACGACTTGAATTTCTCAGAATAGAAAGTGTTAGTTTTTCTGGAAGTTTTAATAGCATTTCTAGCGAATTGCGATATCTTGAGTGGAATGATTATCCGTTTACGTATTTTCCATCATGTTGTAAGCTATCCGATGGCACAATGTGTCTGGACAATTTGAAGGAATTGAATCTCTTTGACTCCGAAAATCTTGTGAAGCCTCCAAACCTTAGCCAGGCTCCAAATCTTGAGCGGCTGTTCCTTATAAGATGTAGAAAGCTTAAGCACATACATCCATCAACTGGAGACCTAAGAAAATTTGTTCAGTTAGATTTGAGTGGGTGCACAAGTTTAATGAGTTTTCCCATCCCTGTATTCGCGGCAGAGCGAACAAAACTTGTGAAAAGGGGAGAATTGAGTATGTTGAACTGCCCGAAAATAGTAGAGAAGGAAAGGTTGAGTGGAATGGGTAGTTCATGGATGAGAGAGTACATTAAGGTACACAATGAATCCACTGGTAGAGTTGCTATTGTAATACCAGGGAGTGGAGTTCCAATTCCAAGGTGGTTTAAGGATCAGAATAAGGGGGCGGATAATTCAATGTGGATAGAATCATTTCCGAATGCCAATGACAACAATTGGATTGGCATTGCCCTTTGTGCCCACATTCTTGTTCAATTTGAACAATCCCTCTCCATTAAACTCTACTTTTACGACCATACAGGAAAAGGCAACCTAGTGTACTATGTTTATTGGCATGAAAAGGAGGAGGAGGTGAGGGGTGAATTGGTTCACCTCTGCCTATTCTATCTTTCTCGCCAACTACTCATTCAGGATGGAAAGCTGCATGATCTTCATGGATCCCGCTTTGTATTCGAAGCTAATGCCCACAACTATGTGGATGTGAAGAAGTGGGGAATACGTGTGGTACTGAACCAGGATTTGAATCCCGCTTTTTATTGA 2133 0.3343 MECRSIQSMASSSTRPKYDVFVSFRGEDVRNTFADHLFAAFRRNGIVAFRDDRNLMQGQHISTELVQAIEGSQQYDNRTKSVAYFLRFANLSGWDIQNKQENGEIEKIVKRVRSKLGCNSLSVDGLVGMQSRVEELENLIDFNSDNEVRVVGVCGMGGIGKSTLARVVYGRNLHKFGAHCFVDDISKVFRDAGGLSSLQKQLVCQITNGEIQDIYNHYEAKSLMKTMLRCQKALIVLDNAEEVEQLEKLGVTRDCLCPGSRIVVTSRDQHVLNSFGLDQTYKVQLLNDDEAHQLFCEKAFDDNIIMSCDEISREYKKLTDLALKYAQGLPLAVKGMRIVRQSAPNEPWKWSRIWCKEDFQRIMFGNTVIDDVKAVQLRGLYDEERNMTLRAETLSRMRRLEFLRIESVSFSGSFNSISSELRYLEWNDYPFTYFPSCCKLSDGTMCLDNLKELNLFDSENLVKPPNLSQAPNLERLFLIRCRKLKHIHPSTGDLRKFVQLDLSGCTSLMSFPIPVFAAERTKLVKRGELSMLNCPKIVEKERLSGMGSSWMREYIKVHNESTGRVAIVIPGSGVPIPRWFKDQNKGADNSMWIESFPNANDNNWIGIALCAHILVQFEQSLSIKLYFYDHTGKGNLVYYVYWHEKEEEVRGELVHLCLFYLSRQLLIQDGKLHDLHGSRFVFEANAHNYVDVKKWGIRVVLNQDLNPAFY 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04604 710 Gene3D - 10 75 IPR035897 -
Adu03g04604 710 Gene3D Ribonuclease Inhibitor 383 548 IPR032675 -
Adu03g04604 710 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 339 IPR027417 -
Adu03g04604 710 Gene3D - 104 284 IPR027417 -
Adu03g04604 710 SUPERFAMILY L domain-like 390 512 - -
Adu03g04604 710 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 75 - -
Adu03g04604 710 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 85 334 - -
Adu03g04604 710 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 335 437 - -
Adu03g04604 710 ProSiteProfiles TIR domain profile. 16 189 IPR000157 GO:0007165
Adu03g04604 710 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 73 IPR035897 -
Adu03g04604 710 Pfam TIR domain 17 73 IPR000157 GO:0007165
Adu03g04604 710 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 75 IPR044974 GO:0006952
Adu03g04604 710 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 85 334 IPR044974 GO:0006952
Adu03g04604 710 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 445 517 IPR044974 GO:0006952
Adu03g04604 710 Pfam NB-ARC domain 132 336 IPR002182 GO:0043531
Adu03g04604 710 PRINTS Disease resistance protein signature 227 241 - -
Adu03g04604 710 PRINTS Disease resistance protein signature 326 340 - -
Adu03g04604 710 PRINTS Disease resistance protein signature 150 165 - -
Adu03g04604 710 PRINTS Disease resistance protein signature 492 508 - -
Adu03g04604 710 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 445 517 - -
Adu03g04604 710 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 335 437 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04604 Adu-Chr3 135295519 135298917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04604 410 514 WRKY Transcription Factor Family AT5G45050 35.246 8.01e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04604 - - adu:107482285 498.819