Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04603 ATGGCAGCACAAAGTTCGGATGCTTGTCCTTCTGAATCCTCAAGCATCTCTGGCACCTCCCAAGGGATTGATAACAACACAAGGGACAATGATCTAGCTTCTGAACCGGACCAAGCCTCAAATTCCAATAATAATATGGAAAGGATGTTGGATTTTGTGAAGCTCTCCCACAACGATGTTTCATCGATTCGATGTTCTTCCAACGTGAAAGAGCTCGATTTTTTCAACACTGGGAAGAGGGTGATGGGATCATCGTCAACTTGGACTAATAATAATGTTGACGAAGGAAAAGATGAAAACACCGAAGAAAAAGAAAGGATTTCAGAGCCGAAAACTTTCTCTTGCAATTTTTGCAAGAGAGAGTTCTCGTCCTCTCAAGCCCTTGGTGGGCACCAAAATGCCCACAAACAAGAGCGTGCGATAGCGAAACGTCGCCAAGGGATGGACACGGGTGCTTTTGGTCACCCTCACTTTCCATATTACCCTTACCATAGCTTTTCCACACCATCTTTATACGGGTCCTATAATAGGACACTTGGGGTAAGAGTCGAATCCATGATTCACAAACCTTCTTATCCTTGGTCTGCTGCTCTTAGGTTTGGTCGTAATCTTAATTGGTCAACGCAGGGGATTCTTGGTTCATCATCATCATTAGCACTTGATAGGTTAAGTATTGAGGGTTTGCAACCAAATAATGAAGTAGGCGGGGTTAGTGGAATTCAAGCAAGTTCTTCAAATTTGAGAAAAGAAGATGATAATGGTGGTAATGGAACTAATCCCCAATTAGGAGATTCTTCTACCAACAATGTTGCTACAAGTCTCACTCGCCATGCAAAGGATGATCAGGATCCCAAGACAGATAATGAACCCTCTAGTTCTGAGTCTCTGGGGCTTGATTTGTCACTTAAGCTTTAA 915 0.4295 MAAQSSDACPSESSSISGTSQGIDNNTRDNDLASEPDQASNSNNNMERMLDFVKLSHNDVSSIRCSSNVKELDFFNTGKRVMGSSSTWTNNNVDEGKDENTEEKERISEPKTFSCNFCKREFSSSQALGGHQNAHKQERAIAKRRQGMDTGAFGHPHFPYYPYHSFSTPSLYGSYNRTLGVRVESMIHKPSYPWSAALRFGRNLNWSTQGILGSSSSLALDRLSIEGLQPNNEVGGVSGIQASSSNLRKEDDNGGNGTNPQLGDSSTNNVATSLTRHAKDDQDPKTDNEPSSSESLGLDLSLKL 304
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04603 304 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 5 304 - -
Adu03g04603 304 MobiDBLite consensus disorder prediction 234 275 - -
Adu03g04603 304 MobiDBLite consensus disorder prediction 229 304 - -
Adu03g04603 304 MobiDBLite consensus disorder prediction 86 108 - -
Adu03g04603 304 ProSitePatterns Zinc finger C2H2 type domain signature. 115 135 IPR013087 -
Adu03g04603 304 PANTHER ZINC FINGER PROTEIN JAGGED 5 304 IPR045320 GO:0003700
Adu03g04603 304 Gene3D Classic Zinc Finger 90 152 - -
Adu03g04603 304 ProSiteProfiles Zinc finger C2H2 type domain profile. 113 140 IPR013087 -
Adu03g04603 304 MobiDBLite consensus disorder prediction 1 44 - -
Adu03g04603 304 SUPERFAMILY beta-beta-alpha zinc fingers 110 140 IPR036236 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Adu03g04603 Adu-Chr3 135292835 135293749 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04603 108 207 C2H2 Transcription Factor Family AT5G10970 52.427 4.49e-24 97.1
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu03g04603 None None None
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04603 - - ahf:112735686 457.218