Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04574 atgaaggaagaaagaaagcattccgactcatggcatccgacggagCTCGGCCCCAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAAGCCGAGCCCTCAATCATCGCCGCTACCAGAACCAGAACCACTCCCTCCAGCTTCTCTTTCGTTTCCGTCTCCGTACGCGGCGGTGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCTGCAGCGTCTTCGCTCGACCACAAGCCCTTGCTGGCTCCCACTCCCTTCATACTCGGCAAGCGCATACGCACCGACGACGACGCTTCCGCCAAGGACGACGGCGTCTCCGTGGGGTCCTTAGTGGGCCCTGGAGCTCCTGCGGGGCTCTGGGCCCTCCCGGCCAGGCCTGATTTTGATCAAATTTGGAGTTTCGCAGCGGCTGCTCCTCTGCTGGAGATGGTTGTGCAGTCGGCGATGGTGTCGGTGTCTCACAGCAACAAGCTTCTTTGTTCGTTCACCATCGGCATCAGCAGCAGCAACAAGCCATGGGAGAAGCTTCGGCGGCGAGGCTAA 543 0.5635 MKEERKHSDSWHPTELGPKSDGQTIEWLLRQAEPSIIAATRTRTTPSSFSFVSVSVRGGAGSLSSPSSTSAASSLDHKPLLAPTPFILGKRIRTDDDASAKDDGVSVGSLVGPGAPAGLWALPARPDFDQIWSFAAAAPLLEMVVQSAMVSVSHSNKLLCSFTIGISSSNKPWEKLRRRG 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04574 180 MobiDBLite consensus disorder prediction 1 24 - -
Adu03g04574 180 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 15 148 - -
Adu03g04574 180 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 148 IPR005333 GO:0003700
Adu03g04574 180 ProSiteProfiles TCP domain profile. 1 39 IPR017887 -
Adu03g04574 180 Pfam TCP family transcription factor 15 71 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04574 Adu-Chr3 135011988 135012530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04574 15 137 TCP Transcription Factor Family AT5G23280 60.630 1.68e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu03g04574 TCP 1.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04574 K16221 - cpap:110813909 146.362