Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04555 ATGCAGGTTGTTCGATCTCATCAGAGTCACAGGAGCTTCTCCTCCTCCAGTGGCTCCGTTTCAGCTTCTCCGACCCTTCCCCTTTATCGCTCCGCTCCAGAGCTCGAAGTCAGGCTAGAAGATTTCGAATCTTTTGCCATCGATCGTCTACGAGTTCTCAAGGGGATATCTGATGGCTTGTCAAGGGGAAAGAAACCGGACGAAATGGAAAAATTGGTAAATGAGCTGTGGAAAACAAATATGAGACATCAAGATTCGTCTCAGGTTCCGAACAAGGATATTATATCTCATTTTGTTCTCCGTCTTGTGTATTGCAGAACGGAGGAATTGAGGAAATGGTTTCTTTCTATGGAATCTGCACTCTTTCGCCACCGATTTCGTAATCAAACTGCTGAAGCTCAGCGGGCCATCATGGAAGAATTTGACCTTCCTTGCAAGGCTGTAAGCAATGCAGAATTTGAGAGCTTGAAAGAGAAATTGGGACAAGTTGCACGTTCTATTGGTCATAACCTGTCTTTATCCACTACGGATGCAATCTACTATAAGGTACCATTTGAAGAAGTTCCAGAGCTTGTAACTGGACGGAAAGTATTTATAAATCAGGGATATGCATACGTTGCAATGAATCAGGTTGTTTCACTTGTAGCCACAATTTTTCGTAGTCTTCTGTCAAAGGCACTCATCCTAACAAACAGAAAATGGGCAACTTCAATTAGAGAACAAGAACAACATAGGTTGACTCCTATTGTGGAGGCCCTGTGTTCGAGCTATTTGGGTCCTGATTTTTCTCAGCCTAAAGAATATGGTGAGATATCATTAAAGGACATTGATCAGGTTGCCAAGAGTTCATTTCCTTTGTGCATGCGTCACCTATTTGAAAAGCTGAGAGAGGATCATCATTTAAAGCATGCAGGGAGGATGCAACTAGGCTTATTTCTGAAGGGTGTTGGCCTGAACGTAGATGATTCACTTGCATTTTGGAGAGAGGAGTTCTCTAAAAAGGTTGGTCTGGAGAAGTTTGAGAAAGAATATGCATACAACATACGCCATAATTATGGGAAAGAAGGGAAGAAAACTGATTATACTCCATATTCTTGTCAAAAGATTATTTTATCAACTCCTGGTGTTGGAGATCATCATGGTTGCCCTTATCGACATTTTGGCGAGGAGAATCTAAGAGCTGCTCTCAGTAGAATGGGGGTTAATAGTCGGGCAATGGAAGATGTGATGGGCAAAGTGAGAAATAGAGATTATCAGTTGGCCTGCACCTTGACATTTGAAGCTCTTCATGCGGCGCCATGTGATGCAGGGATTAACCATCCAAATCAATACTTCAGTGACAGTCAAAGGCTATTAAAGGCAAAGAAGGACTCTTCAACATAA 1383 0.423 MQVVRSHQSHRSFSSSSGSVSASPTLPLYRSAPELEVRLEDFESFAIDRLRVLKGISDGLSRGKKPDEMEKLVNELWKTNMRHQDSSQVPNKDIISHFVLRLVYCRTEELRKWFLSMESALFRHRFRNQTAEAQRAIMEEFDLPCKAVSNAEFESLKEKLGQVARSIGHNLSLSTTDAIYYKVPFEEVPELVTGRKVFINQGYAYVAMNQVVSLVATIFRSLLSKALILTNRKWATSIREQEQHRLTPIVEALCSSYLGPDFSQPKEYGEISLKDIDQVAKSSFPLCMRHLFEKLREDHHLKHAGRMQLGLFLKGVGLNVDDSLAFWREEFSKKVGLEKFEKEYAYNIRHNYGKEGKKTDYTPYSCQKIILSTPGVGDHHGCPYRHFGEENLRAALSRMGVNSRAMEDVMGKVRNRDYQLACTLTFEALHAAPCDAGINHPNQYFSDSQRLLKAKKDSST 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04555 460 Pfam Eukaryotic and archaeal DNA primase, large subunit 180 445 IPR007238 GO:0006269
Adu03g04555 460 PANTHER DNA PRIMASE LARGE SUBUNIT 1 456 - -
Adu03g04555 460 PIRSF DNA_primase_large 1 460 IPR016558 -
Adu03g04555 460 PANTHER DNA PRIMASE LARGE SUBUNIT 1 456 IPR007238 GO:0006269
Adu03g04555 460 CDD PriL_PriS_Eukaryotic 28 448 IPR016558 -
Adu03g04555 460 MobiDBLite consensus disorder prediction 1 23 - -
Adu03g04555 460 Gene3D - 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04555 Adu-Chr3 134891399 134898074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04555 1 459 Core DNA Replication Machinery Family AT1G67320 65.517 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04555 K02685 - gmx:100816023 756.903