Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04549 ATGGCAACCGGTGATGATTACAATATTGATGATTTGTTTCAAGAAGCTCAAAGCAGATGGCTGAAGCCTGTGGAAGTGATGTACATTTTACAGAATCATGACAAGTACCAGTTCACACAAGAGCCCCCTCAACAACCAACAAGTGGATCACTTTTTCTCTTTAACAGAAGAGTCCTGCGCTTCTTTCGTAGAGATGGCCATAACTGGCGCAAGAAGAAAGACGGAAGGACTGTCGGAGAGGCACACGAACGCCTTAAGGTTGGAACTGTCGAAGCCTTAAATTGTTACTATGCACATGGAGAGCAGAACCCTACTTTCCAGAGGCGGAGCTATTGGATGTTGGATCCGGCATTTGAGCATATTGTTCTTGTGCATTATAGAGAAACAAGTGAGGGAAGGTCCAGCTCTGGACCTGGCACACAATTGTCACCAAGTTCCTCTTCTGCATTTGGCCAGAGTCCTAGCTCATATTCTGCTCAGACACCATTGTCAACATCTGTACTTGGTGATCCATATGAACCTAATCAGAGTTACTCTAGTTCTGGCACCGGAGAAGTTACCTCTGATGTATTCATCATGAATGATGGAATGAGTCACCTGGATGGGACATATGCAGACTCAGGAACTTCAACTGAAGTTGAGGTTACTCGAGCTTTGTTGCGCAGATTGGAGGAGCAGTTAAGTTTGAATGAAGACAGCATCAAAGAAATTGCTTCCTTCTACGGTGAGAAAGAAATTACAGGTGATTCAAATGCTCAACAAAATCAAGGGTTGACCTGTAAGCAAGAGGAATCTGCAGCTTTTGCTAGACCAGATGATTATGGGCTAATTTTTTATGGACATAATGGAACCCAAGATGAAGGTGATAAGTCTTATGAATTAATGGACCATACATACCGTGATGGAAATGAAAAGGATATATGGACAGAGGTGCTGGAATCATGCAAGTCGTCATCCACAGCCAGGTTACCACAGAAAAATGTATACATGCCAGCCGGAAAATACTTAAAGCAGGAAAATTCACCTTCTTCGTCAAGAAAGGAACCAATTGCCAATCAGGATGATAGTCACTGGCTAAACTTCAACAGTAATAACACAGAAAACTCTGTTTTCTCACTACCTGAAGGTGATAGTGGAGTTGAATATCCCCCATATTCTTCTGTGCTAGAGGCACAAAAAGCTAATTCTGAGTACTATGCAACATTGTTTGCCCAAAGCCAAATTGGACCATCTCTGGATGCAGACTCAAGCTTGACTGTCTCACAAAAACAGAAATTTTCTATTAAGGCAGTCTCCCCAGAATGGGGTTATACCACTGAGACTACTAAGATCATCATTGTTGGGTCTTTTCTGTGTCATCCTTCAGATTCTGCCTGGGCTTGTATGTTTGGTGATGTTGAAGTTCCCATTGAGATAATTCAGGACGGTGTAATCAGTTGTGAAGCTCCATCTCGCCTTTCTGGAAAGGTTAATCTCTGCATTACTTCTGGTAATAGGCAGTCCTGCAGTGAAGTCAGAGAGTTTGAGTATCGTAATAAGACAAGTATTTGCACTTACTGTAACTCATCGGCAACAGAAGCCAACAGAAGTCCAGAAGAGCTGCTGTTACTCGTTAGATTTGCACAGATGCTGCTTTCTGGTTCAACTACAAAGAATGATGACATAGAATCTGGAACTCATCTAGTAAAACAGAAAGCCGATGATGATTCATGGAGCCATATTATAGAGGCTCTTCTAGTGGGCAGTGGAACTTCATCTGGTATGGTCGATTGGCTTCTCGAAGAGCTTCTTAAGGATAAGCTGCAGCTGTGGCTTTCTTGCAGGTCCCAGGAGAAAGATGAAGTAACAGGCTGTTGTTTGTCGAAGAAAGAGCAGGGAATCATTCACATGCTAGCTGGATTGGGTTTTGAGTGGGCCTTGCACCCTATTCTCAGTTGTGGTGTGAATATAAATTTCCGTGACATTAACGGATGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGAGAAAAAATGGTTGCTTCACTTATAGCTTGTGGTGCATCTGCTGGAGCAGTGACAGATCCAAGTGCACAAGATCCGAAAGGAAAAACTGCTGCATCTATTGCAGCGAGCAGTGGACATAAGGGACTGGCAGGATATCTTTCTGAGAGAGCTCTGACAAGCCATCTGTCATCCCTCACACTGCAAGAGAGTGAGCTATCCAAAAGTTCTGCACAATTCGAAGCAGATTTAGCTGTTAGTAGTGTCTCCAAGGAAAATCTCGCTGCCGGTGAGGATCAGGCTCCACTTAAACATACCTTGGCTGCTGTCAGAAATGCAACTCAGGCCGCAGCACGTATACAATCTGCTTTTCGTTCGCATTCCTTCAGAAAGCGGAGAGCAAGAGAAGCTGCTGCTGCCACTGCTGGTGGTATCAACGCAGGTAGCATTGGTAACATTCCGGAGCTTTCCGCAATGTCAAAACTTGCCTTTCGGAACTCACGGGATCACAATTCTGCTGCCTTATCTATTCAGAAGAAATTTCGAGGTTGGAAGGGTCGCAAAGATTTCTTAGAATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAGGTTAGAAAGCATTACAAGGTGATATGGGCAGTTGGAATCTTGGACAAGGTTGTCCTGCGATGGCGGAGAAAAGGAGCTGGCCTACGAGGTTTCCGACAGGAGATGGAGACCAGTGCCTTGGATGAAAGTGAAGATGAAGATATTCTCAAGCCTTTTCGCAAACAGATGGTAGATGCAGAAATAAAAGAGGCCGTGTCAAGGGTGCTTTCCATGGTTGATTCTCCAGATGCTCGTCAGCAATATCATCGCATGCTTGAGAAGTATCGTCAAGCTAAGGCTGAACTTGCGGGTACGAGTGAGGAAGCATCATTGTCAACGTCCATTGCGGATGTTTTCAGTATGGAAGATGATATGTATCAGTTTCCTCAGGGCTAA 2982 0.4433 MATGDDYNIDDLFQEAQSRWLKPVEVMYILQNHDKYQFTQEPPQQPTSGSLFLFNRRVLRFFRRDGHNWRKKKDGRTVGEAHERLKVGTVEALNCYYAHGEQNPTFQRRSYWMLDPAFEHIVLVHYRETSEGRSSSGPGTQLSPSSSSAFGQSPSSYSAQTPLSTSVLGDPYEPNQSYSSSGTGEVTSDVFIMNDGMSHLDGTYADSGTSTEVEVTRALLRRLEEQLSLNEDSIKEIASFYGEKEITGDSNAQQNQGLTCKQEESAAFARPDDYGLIFYGHNGTQDEGDKSYELMDHTYRDGNEKDIWTEVLESCKSSSTARLPQKNVYMPAGKYLKQENSPSSSRKEPIANQDDSHWLNFNSNNTENSVFSLPEGDSGVEYPPYSSVLEAQKANSEYYATLFAQSQIGPSLDADSSLTVSQKQKFSIKAVSPEWGYTTETTKIIIVGSFLCHPSDSAWACMFGDVEVPIEIIQDGVISCEAPSRLSGKVNLCITSGNRQSCSEVREFEYRNKTSICTYCNSSATEANRSPEELLLLVRFAQMLLSGSTTKNDDIESGTHLVKQKADDDSWSHIIEALLVGSGTSSGMVDWLLEELLKDKLQLWLSCRSQEKDEVTGCCLSKKEQGIIHMLAGLGFEWALHPILSCGVNINFRDINGWTALHWAARFGREKMVASLIACGASAGAVTDPSAQDPKGKTAASIAASSGHKGLAGYLSERALTSHLSSLTLQESELSKSSAQFEADLAVSSVSKENLAAGEDQAPLKHTLAAVRNATQAAARIQSAFRSHSFRKRRAREAAAATAGGINAGSIGNIPELSAMSKLAFRNSRDHNSAALSIQKKFRGWKGRKDFLELRQKVVKIQAHVRGYQVRKHYKVIWAVGILDKVVLRWRRKGAGLRGFRQEMETSALDESEDEDILKPFRKQMVDAEIKEAVSRVLSMVDSPDARQQYHRMLEKYRQAKAELAGTSEEASLSTSIADVFSMEDDMYQFPQG 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04549 993 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Adu03g04549 993 Coils Coil 950 970 - -
Adu03g04549 993 PANTHER CALMODULIN-BINDING PROTEIN 1 990 - -
Adu03g04549 993 Gene3D Immunoglobulins 420 515 IPR013783 -
Adu03g04549 993 SMART iq_5 830 852 IPR000048 GO:0005515
Adu03g04549 993 SMART iq_5 773 795 IPR000048 GO:0005515
Adu03g04549 993 SMART iq_5 853 875 IPR000048 GO:0005515
Adu03g04549 993 Gene3D - 534 720 IPR036770 -
Adu03g04549 993 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 822 877 IPR027417 -
Adu03g04549 993 SMART CG_1_2 12 130 IPR005559 GO:0003677
Adu03g04549 993 Pfam IPT/TIG domain 428 510 IPR002909 -
Adu03g04549 993 SMART ANK_2a 656 685 IPR002110 GO:0005515
Adu03g04549 993 SMART ANK_2a 695 724 IPR002110 GO:0005515
Adu03g04549 993 MobiDBLite consensus disorder prediction 130 185 - -
Adu03g04549 993 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 990 - -
Adu03g04549 993 SUPERFAMILY E set domains 428 511 IPR014756 -
Adu03g04549 993 Pfam IQ calmodulin-binding motif 833 851 IPR000048 GO:0005515
Adu03g04549 993 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Adu03g04549 993 Gene3D - 831 879 - -
Adu03g04549 993 ProSiteProfiles IQ motif profile. 831 860 IPR000048 GO:0005515
Adu03g04549 993 ProSiteProfiles IQ motif profile. 854 879 IPR000048 GO:0005515
Adu03g04549 993 Pfam Ankyrin repeats (3 copies) 643 717 IPR002110 GO:0005515
Adu03g04549 993 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Adu03g04549 993 SUPERFAMILY Ankyrin repeat 625 717 IPR036770 -
Adu03g04549 993 ProSiteProfiles Ankyrin repeat region circular profile. 656 682 - -
Adu03g04549 993 ProSiteProfiles IQ motif profile. 774 803 IPR000048 GO:0005515
Adu03g04549 993 CDD IPT 427 511 - -
Adu03g04549 993 ProSiteProfiles Ankyrin repeat profile. 656 688 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04549 Adu-Chr3 134837587 134842991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04549 7 991 CAMTA Transcription Factor Family AT1G67310 50.485 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Adu03g04549 CG-1 5.3e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04549 K21596 - gmx:100786880 1454.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04549 03 134837587 134842991 Adu03g04549 03 134837587 134842991 ECH