Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04547 ATGTCATCTCGATTTGTCGATGGCGCCAGTAGAGTAGGCGTTCCTCCTAAGTTGTTCATTCTTGTTAATTCTAATGGCTGGACATCAGGTATTGGTAATCCCACTGTGATCGTAAAACCTCTGAGAGCAAGTATGCTTGCTGCCTCGCTGCAGCGAGCCATGGGTGTTACTTGCCGAAATGGGGAGCTTCCGAGTTTATCTGTTGGCCACCTTCTTGGCGGGAAGAAAATTCTAATTGTAGATGACAATGTTGTGAACCGCACCGTAGCAGCTGGTGCTTTGAAAAAGTATGGAGCAGATGTGGTGTGTGTTAGCAGCGGAAAAGAGGCCATCTCTAAACTAAAACCACCCCATGAGTTCGATGCGTGCTTCATGGATATTCAAATGCCAGAAATGGACGGTTTTGAAGCTACAAAGAAAATCAGGGAGATGGAACGTTGCGCCAAGAGAGAAGGTTTTGTAGATAACTTATCAAAGTGGGATGTCCCTATTTTGGCCATGACTGCAGACGTGATCCAGGCTACCCATGAGGAGTGTGTAAGGTGTGGCATGGTTGGATATGTTTCTAAACCGTTTGAAGCCGAACAGCTTTATCGAGAAGTCTCAAGCTCCTTGCTCACCTTCGAAGGCCAGAAGATCCAGGGCGCCCAGAACATCGTCGCCAAGCTCACCTCTCTCCCTTTCAACCAGTGCCTTCACTCCATCACCACCGTTGACTGCCAGCCCTCCTCCGCCCCCAACGGCATGCTTGTCTTCGTCAGCGGCAACCTTCAGCTCGCCGGCGAGCAACACGCCCTCAAGTTCAGCCAGATGTTCCATTTGTTACCAACACCACAGGGAAGCTACTATGTTTCGAACGATATATTCCGGTTGAACTATGCTTGA 885 0.4915 MSSRFVDGASRVGVPPKLFILVNSNGWTSGIGNPTVIVKPLRASMLAASLQRAMGVTCRNGELPSLSVGHLLGGKKILIVDDNVVNRTVAAGALKKYGADVVCVSSGKEAISKLKPPHEFDACFMDIQMPEMDGFEATKKIREMERCAKREGFVDNLSKWDVPILAMTADVIQATHEECVRCGMVGYVSKPFEAEQLYREVSSSLLTFEGQKIQGAQNIVAKLTSLPFNQCLHSITTVDCQPSSAPNGMLVFVSGNLQLAGEQHALKFSQMFHLLPTPQGSYYVSNDIFRLNYA 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04547 294 Pfam Response regulator receiver domain 77 200 IPR001789 GO:0000160
Adu03g04547 294 CDD REC_hyHK_CKI1_RcsC-like 77 201 - -
Adu03g04547 294 CDD NTF2 187 293 IPR018222 -
Adu03g04547 294 PANTHER HISTIDINE KINASE 3 13 204 - -
Adu03g04547 294 Gene3D - 73 190 - -
Adu03g04547 294 SUPERFAMILY CheY-like 73 202 IPR011006 -
Adu03g04547 294 Pfam Nuclear transport factor 2 (NTF2) domain 196 291 IPR002075 -
Adu03g04547 294 PANTHER TWO-COMPONENT HISTIDINE KINASE 13 204 - -
Adu03g04547 294 SMART REC_2 75 201 IPR001789 GO:0000160
Adu03g04547 294 Gene3D - 191 294 - -
Adu03g04547 294 CDD PRTases_typeI 31 104 IPR000836 -
Adu03g04547 294 ProSiteProfiles Response regulatory domain profile. 76 205 IPR001789 GO:0000160
Adu03g04547 294 ProSiteProfiles Nuclear transport factor 2 domain profile. 196 291 IPR018222 -
Adu03g04547 294 SUPERFAMILY NTF2-like 197 292 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04547 Adu-Chr3 134829172 134832770 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04547 16 202 Miscellaneous Gene Families AT1G27320 63.902 1.91e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu03g04547 Response_reg 3.7e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04547 K14489 - gmx:100776798 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04547 03 134829172 134832770 Adu03g04547 03 134829172 134832770 ECH