Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04535 ATGATGGAAGATCCAGAGCAAAGGGATCGGAAGTTCAGGGAGCACGTTTATGCCGTGAAAGAAAGGTGCGCCAAGACCAAGGAGATGTGGAGCATCCCTATGCGACCCTATGGCTTCTGGACCTTCGACCGCCACAACTCTCAGCTCGCTTGGGACGCCCAGATCGCCAAGGTCCCAGGCCGCATGGAGCCCTACGAAGAACTCCTCCCATACTTCTTAGAATGGAGTAACAATGCTAGCAGCAAAGACAGTGTTCAAGTTCTAAGAGGCGATCCCCTGACCGATGCTCACAAAGGATTTGACCCCGCAGCGCAAAGGGTCATGAAAGAGATAGGTGCCATGATGGAGAAGTTCGCCAAGCACATGAGAGTTCCGTTCAAGTTCAACGTCATTCACCATTCCGGCCATCTCTCCGAGTTCAATTTCGGAGAATTGAACATCAGGGATGACGAGACATTGGTTGTTAACTGCGTCAATGTTGAGCTGAGCGTTAAGAAGAGAGGAACATGTTTCCTGTTAGGTATAAGAACATGA 534 0.5019 MMEDPEQRDRKFREHVYAVKERCAKTKEMWSIPMRPYGFWTFDRHNSQLAWDAQIAKVPGRMEPYEELLPYFLEWSNNASSKDSVQVLRGDPLTDAHKGFDPAAQRVMKEIGAMMEKFAKHMRVPFKFNVIHHSGHLSEFNFGELNIRDDETLVVNCVNVELSVKKRGTCFLLGIRT 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04535 177 Pfam NADH-ubiquinone oxidoreductase 11 kDa subunit 1 69 IPR035204 -
Adu03g04535 177 Pfam GRAS domain family 104 159 IPR005202 -
Adu03g04535 177 PANTHER EXPRESSED PROTEIN 1 108 IPR035204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04535 Adu-Chr3 134724826 134727219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04535 79 169 GRAS Transcription Factor Family AT4G37650 46.237 6.07e-20 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu03g04535 GRAS 2.4e-10 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04535 - - var:108334416 127.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04535 03 134724826 134727219 Adu03g04535 03 134724826 134727219 ECH