Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04518 ATGGCGGCTGGTAGGCATGGCGGCTATCGTGACAACGAGTTTAGGGACCGTGAGTCGAATTTGGATGTTTCAAGGCGCGGTTTCGCGAATTCGAAGGAAGATTACGACCGGGTTAGGAATGGAGGCCGTGACGTTGTGAGGGGTGGGAGCAGGGATGCAAGAGATAGGATTAGGGTTAGGCAGAAGGATATTAGGGAGAGAGAAGCTTCCAATGGCGGTCACCGGTCATCTTCTAGTAGGAGTGATTCTGGCAGCAGCGGAGGTGGTGGTAGTGATGGTGGCGGGCTTGGGCCCCGACGGTGTGGCTTTTCTGCCAAGACCATGGATAAGGAGCCTGGTGAACTTTCCAGTGAGAGTGGGTCTGATGGTGCTATTGAACCAGAGTCAATGATGAAAGACAGCGAGGTTGCGAATGTTGAACAGAATAGGACTCGATCCCCGCCCCCACCAGAGAAGAAAAGGAAGTTTTCACCGATTGTGTGGGATCAGGATGACAAGGAAGTGAGCGAGCCATCTAAAACCAAATCTAAGGTTTCCACTGCTCCAGTGACTGCTCTTCCACCTCCGCCTCCACTGCCAAAATCATTTGTGCGGTCACCTAATGTTCCATATGGTGGAGTTGAGATACATCCTGTCAAAAAGAGTGAAACTAAGGATGTTGAATTACCGGAAGCTACTAGGGCCACTATGCCTTCTCCAGGATCGCATTCCATTTCTCCGAAACAGGCTTGGCATAATGATCGTGAAGCTGAGCAACAAGAAGGTGAGGATTATGTTCCTAGTCATAATATATCATCTTCCAGATGGGCAGCTGTAGATAACTCTCCCGGTGATGAGGGTGAAATCATCGATGATGAAGAATTGCCTAGGAGGAAGAGGAGGCTGTCTCCTGAGTTATTGGATACAAAACTACGGAACAAACTATTAAGCCCAGTGGAATCTAAAAAAGAAGGATTTGATGGTGGCAGAGCTAAATCATCTGAATCAGATGAACGAGGTAGCCATGGGAGAACGTCCAGTGGGGATGATCATCCTGGAACTGCGTCTGAGAAGGATGACTACATGGAGATTGATGCTCAAGGTGGAAAAAGTGATACTAGTATTAATCATTCGGAGACGGATTCTGAGGACGAGGATGATAGGAGGGAGACTCCGGAACCTCCAGCGACACCACAAAGAATGGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACTTACGGTGTTGTATATAGGGCCAGAGATAAGAAGACTGGAGAAATTGTAGCATTGAAGAAAGTCAAGATGGAGAAGGAAAGAGAAGGATTTCCACTGACTTCACTTAGGGAAATAAACATTCTTCTTTCTTTCCACCACCCATCCATAGTTGATGTTAAGGAAGTAGTGGTAGGGAGTAGCCTTGATAGTATTTTCATGGTTATGGAATACATGGAGCATGATCTTAAAGGTCTGATGGAAGCAATGAAGCAACCATTTAGCCAGAGTGAAGTAAAGTGCTTAATGATCCAGCTTTTAGAAGGTGTTAAGTATCTTCACGATAATTGGGTGCTTCATAGGGATTTAAAAACTTCTAACCTCCTTTTGAATAATAGAGGTGAACTAAAAATATGTGATTTTGGTTTGGCTCGACAGTATGGGAGTCCATTGAAACCATACACACATCTCGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTAGGGTCAAAACAATATTCAACAGCCATTGACATGTGGTCTCTAGGTTGTATCATGGCGGAACTTTTGTCCAAAGAACCACTATTCAATGGGAAAACAGAATTTGATCAGCTTGATAAGATTTTTAAGATTCTTGGCACACCAAACGAAACAATTTGGCCTGGGTTCTCAAAATTACCTGGAGTCAAGGTCAATTTTGTTAAGCACCAGCTTCCAACTTTGGGTGGTTCTGGTATAACCTCCTGCGCAAAAAGTTTCCTGCCACTTCGTTCACTGGTTCCCCAGTCCTTTCTGATGCTGGATTTGATTTGTTGA 2049 0.451 MAAGRHGGYRDNEFRDRESNLDVSRRGFANSKEDYDRVRNGGRDVVRGGSRDARDRIRVRQKDIREREASNGGHRSSSSRSDSGSSGGGGSDGGGLGPRRCGFSAKTMDKEPGELSSESGSDGAIEPESMMKDSEVANVEQNRTRSPPPPEKKRKFSPIVWDQDDKEVSEPSKTKSKVSTAPVTALPPPPPLPKSFVRSPNVPYGGVEIHPVKKSETKDVELPEATRATMPSPGSHSISPKQAWHNDREAEQQEGEDYVPSHNISSSRWAAVDNSPGDEGEIIDDEELPRRKRRLSPELLDTKLRNKLLSPVESKKEGFDGGRAKSSESDERGSHGRTSSGDDHPGTASEKDDYMEIDAQGGKSDTSINHSETDSEDEDDRRETPEPPATPQRMVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFKILGTPNETIWPGFSKLPGVKVNFVKHQLPTLGGSGITSCAKSFLPLRSLVPQSFLMLDLIC 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04518 682 PANTHER - 153 652 - -
Adu03g04518 682 MobiDBLite consensus disorder prediction 183 197 - -
Adu03g04518 682 MobiDBLite consensus disorder prediction 308 359 - -
Adu03g04518 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Adu03g04518 682 MobiDBLite consensus disorder prediction 74 88 - -
Adu03g04518 682 PANTHER CELL DIVISION PROTEIN KINASE 153 652 - -
Adu03g04518 682 Gene3D Transferase(Phosphotransferase) domain 1 490 672 - -
Adu03g04518 682 SMART serkin_6 407 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04518 682 SUPERFAMILY Protein kinase-like (PK-like) 399 645 IPR011009 -
Adu03g04518 682 MobiDBLite consensus disorder prediction 258 272 - -
Adu03g04518 682 MobiDBLite consensus disorder prediction 242 256 - -
Adu03g04518 682 ProSiteProfiles Protein kinase domain profile. 407 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04518 682 Pfam Protein kinase domain 407 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04518 682 MobiDBLite consensus disorder prediction 369 387 - -
Adu03g04518 682 MobiDBLite consensus disorder prediction 146 173 - -
Adu03g04518 682 MobiDBLite consensus disorder prediction 8 73 - -
Adu03g04518 682 MobiDBLite consensus disorder prediction 284 301 - -
Adu03g04518 682 Gene3D Phosphorylase Kinase; domain 1 391 489 - -
Adu03g04518 682 MobiDBLite consensus disorder prediction 1 393 - -
Adu03g04518 682 CDD STKc_CDC2L1 401 648 IPR045267 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04518 Adu-Chr3 134548238 134555562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04518 398 638 Core Cell Cycle Gene Families AT5G10270 52.344 6.99e-86 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Adu03g04518 Pkinase 2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04518 K08818 - gmx:100792524 967.992