Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu03g04508 | ATGGCCATTGTGGATACTCTGCTTGTAACAGCCAATGTGGCATTCTTCTATGCAATTCTGATATGGCTGCTTCTTCACACTTTGAGACAAAGCAAGCTTCAACGTGCTGTGTTTCTCCAACAAGGACCAAAATTCTTCTCCATTATCACTCTCCTATTCAATTTCATTCTTACCCTTTTAACTATAGCTTTTGCAGTTCATGAATATAGGACTAATAAAATAGTGAGATATAGTTCTGTTACATTTGCTCTAACATGGGTTATGGCAAGCTTGGTTTCATTCTATTCAATGAAGAAGACAACAAGAGATAACAAAAGATTCCCTTTTGTTCTGGTTCTCTGGTGGGTCTGGGCCAGTATCATAGAGGCAATCTCAGTTTCTATTGGACTAATGAAGAACAACTTTGAATACTTGGACTTCTGGAATTTCTTGTCAGAGGATGATAACATAGTTGGTGTGGTTTCCTTGCCTATGTTGTTGTTGCTTTTGTGTTTGAGTTTTTGTGCAAGAGAAGAACAACACAACACTGACATGGAACAGCTCTTGGTTCACCCTGGAGAAGAAGAAGAAGAAGATGATGATGATGAAGATGGAGAGAACTTCACAACTGCAGGCATTTGGAGCCAACTCACATTTCGATGGCTGAATCCCATTTTTAGAAAGGGTCGAGTTCAGAAGCTTGAGCTTGCTCACATTCCTGATGTTCCTCATTCTGAAACTGCAGAAAATGCTTCTTCCTTATTGGAAGAATCGCTTCGCAAACAGAAACTTGAAGGGGCTTCCTTGGCTAAAGCTATAACCAGTTCTGTGTGGAAGTCCTTGGCTTTAAATGCAGTTTTTGCCGGGGTTAATACAATTGCATCTTATATGGGTCCATTGTTGATTACATACTTTGTCAATTTCTTGGTGGATGATAATTCCAATTCAAGCATCCAATGCGGCCTCATTCTTGCATTCATATTCTTCCTCTCAAAGACATTGGAGTCACTGAGCCAAAGACAATGGTACTTTGGTGCTCAGAGAATTGGAATTCGAGTGCGCGCGGCTCTTATGACTCTAATGTACAGCAAGTCTTTAATGATCAAGTGTGCAGGGCCAACCCATGGAAAAATCATAAACTTGGTGAATGTGGATGTTGAAAGAATTGGGGATTTCTGCTGGTACATTCATGGAGTTTGGTTGCTTCCAGTTCAGGTTATTTTGGCCTTAGTGATATTGTACATAAACTTGGGATTCTTGCCTTCAATTTCTGCACTTGCTGTCACCATTTTGGTTATGGTGTGTAACACACCTTTGGCCAATATGCAAGAAAAGTTACACTCCAAGATCATGGAAGCTAAGGATACAAGAATCAAGATGACTTCAGAGACAATGAAGAACATAAGGATACTGAAATTGCATTCATGGGAATCTACATTCTTACAGAAACTCCTCCAATTGAGAGACACTGAGAAGAGTTGGCTGCAGAAGTACCTCTACACTTGCTCAGCAGTAGCAACTCTTTTCTGGACTTCTCCAACTTTGGTTTCTGTTGTTACTTTCGGCATCTGCATACTGGTGAACACAGAACTGACTGCGGCTACTGTCCTCTCGGCCTTGGCAACTTTTCGGATTCTGCAGGAACCAATCTACAATCTTCCTGAGCTGATTTCCATGATAGCTCAAACAAAAGTCTCTCTTGATCGAATCCAAGAGTTGATCAATGAAGAGGATCAGAACCAGTTTATGAACAAGCACTCTTCGAAAGATTCATCAATTGTTATTGAAATCAAGCCAAGTGAATATGCATGGGAAACAAGTGATGGAACCAACAAGAAACCAACAATTCAAATCACAGAAAACTTGAAGATAAAGAAAGGTCAGAAGGTAGCAGTTTGTGGTTCAGTGGGGTCTGGAAAATCAAGCTTACTTTGTTGTATGCTTGGTGAGATTCCATTGGTTTCCGGGACTTTGATCAAAGTCTATGGAACAAGAAGTTATGTGCCACAGAGTCCCTGGATTCAATCAGGAACAGTAAGAGAAAATATCCTGTTTGGAAAGGAAATGAACAAGGACTTCTATGAAAGTGTTTTGGATGGCTGTGCTTTGCATCAAGATATCAACATGTGGGGTGATGGAGATTTGAATATTGTGGAGGAGAGGGGCATAAACTTAAGTGGAGGCCAGAAACAACGGATTCAACTCGCAAGAGCTGTTTACAATGATTCAGATATTTACTTCCTTGATGATCCTTTCAGTGCAGTTGATGCTCATACTGGAACTCATTTATTTAAAAAATGCCTTATGCAACTTTTGTCTGAGAAGACAGTTGTTTATGCTACTCATCAACTAGAATTTTTGGAAGCTGCAGATTTAATTCTGGTAATGAAAGATGGAAAAATAGTGGAGTCAGGAAGGTATAAAGAACTCATAGCATGTCCCAACTGTGAATTTGTTCGACAAATGGCTGCTCATGAAGAAACAATAAACCAAATAAATCCATGGCATGAAGAGAACTCTATTAGCTGCAGGCCCCTTCAAAAGAATCAAATTGAAGTTGCTGAAGAGAATCTTCAAGAAAGCATAAGCAATTGGAAGAGAAACAAAGAAGAAGAAGCAGAGACCGGTCGAGTGAAATGGAGTGTTTACTCAACCTTTGTCACATCTGCATATAGAGGATCACTTGTTCCGGTCATTCTTCTCTGCCAGATTCTGTTTCAAGTGATGCAAATGGGAAGCAATTATTGGATTTCTTGGGCTGCAGAACAAACTGGGAGGGTAACCAAAGGGATGCTTATGGGAACATTTGTTCTTCTTTCTGGTGGAAGCTCTATTTTTATACTTGGAAGGACTGTTTTGATGGCAGTGGTGGCTGTTGAGACAGCTCAGCGTCTTTTTCATGGAATGATTACATCTGTTTTCAGAGCACCTGTTTCATTTTTTGATACCACACCATCAAGCAGAATCCTCAGTAGGTCATCAACAGATCAAAGTACAATTGACACAGACATACCATACAGATTAGCAGGGCTAGTGTTTGCACTAATTCAGTTGTTGAGTATTATCATGCTAATGTCGCAGGTCGCGTGGCAAGTCATCCTTGTGTTTCTTGTGGTGTTTGCTATCTCCATATGGTATCAGGCTTATTACATTACTACTGCCAGGGAATTAGCCAGGATGGTAGGGATCAGAAAGGCCCCAATCTTGCATCATTTCTCAGAATCTATTGCTGGGGCCGCCACGATCCGTTGTTTCAATCAAGAACAAATATTCATGACCAAAATCAAGGATCTTGTTGATGAATACTCTAGAGTAGCCTTTCATAATTATGCCACCATGGAATGGTTGTCAGTCCGGATCAATTTTCTCTTCAATCTAGTCTTCTACTTTGTTCTCATCATCTTGGTTACTCTGCCAAGGTCTGCCATTGATCCCAGCTTGGCAGGTCTGGTAGCTACTTATGGTTTGAACTTGAATGTACTTCAGGCTTGGGTCATATGGAACCTTTGCAATGTTGAGAACAAGATGATATCTGTTGAGAGAATATTGCAATTCTCTAGCATACCAAGTGAAGCACCACTGATAATCCAAGATTGTAGGCCTGAACCAGAGTGGCCTATGGAAGGGAAAATTGAGCTTCAGAATATTCATATTCAGTATGATCCGGCTGGTCCTATGGTTCTCAAAGGTGTCACTTGCACATTCCCGGGGCGAAAGAAGATCGGAGTAGTAGGGAGGACAGGGAGTGGAAAATCAACTCTGGTGCAAGCCCTTTTTCGAGTGGTGGAGCCTTTGGAAGGAAAGATACTAATAGATGGAGTACATATTTCCAAGATTGGTCTGCAGGATTTAAGATCTAAGCTTGGTATAATTCCTCAAGACCCAACCTTGTTTCTAGGCACTGTTAGGACTAACTTGGATCCTCTAGAACAACATGCGGATAAAGAACTCTGGGAGGTTCTCAAGAAGTGCCATCTTGCTGAAATTGTAAGGCAGGATCCAAGACTTCTTGATGCACCAGTGGCTGAGAATGGAGAAAATTGGAGCGTTGGACAAAGGCAACTCGTTTGTCTTGCTAGGCTGCTATTGAAGAAGAGAAGGATTTTGGTTCTAGATGAGGCAACAGCATCTATTGACACTGCAACTGACAATTTAATTCAAAAGACTATTAGAGAAGAAACTAGTGAATGCACAGTGATTACTGTAGCACATAGAATCCCTACAGTTATTGATAATGACTTGGTTTTGGTCCTTGATGAAGGGACAATTGCAGAGTATGATGAACCAGATCAGTTGCTGCAGAACAATACTTCATCTTTCTCAAAGTTGGTTTCAGAATTTTTGAGGAGATCATCCCCCAAGTAG | 4344 | 0.4081 | MAIVDTLLVTANVAFFYAILIWLLLHTLRQSKLQRAVFLQQGPKFFSIITLLFNFILTLLTIAFAVHEYRTNKIVRYSSVTFALTWVMASLVSFYSMKKTTRDNKRFPFVLVLWWVWASIIEAISVSIGLMKNNFEYLDFWNFLSEDDNIVGVVSLPMLLLLLCLSFCAREEQHNTDMEQLLVHPGEEEEEDDDDEDGENFTTAGIWSQLTFRWLNPIFRKGRVQKLELAHIPDVPHSETAENASSLLEESLRKQKLEGASLAKAITSSVWKSLALNAVFAGVNTIASYMGPLLITYFVNFLVDDNSNSSIQCGLILAFIFFLSKTLESLSQRQWYFGAQRIGIRVRAALMTLMYSKSLMIKCAGPTHGKIINLVNVDVERIGDFCWYIHGVWLLPVQVILALVILYINLGFLPSISALAVTILVMVCNTPLANMQEKLHSKIMEAKDTRIKMTSETMKNIRILKLHSWESTFLQKLLQLRDTEKSWLQKYLYTCSAVATLFWTSPTLVSVVTFGICILVNTELTAATVLSALATFRILQEPIYNLPELISMIAQTKVSLDRIQELINEEDQNQFMNKHSSKDSSIVIEIKPSEYAWETSDGTNKKPTIQITENLKIKKGQKVAVCGSVGSGKSSLLCCMLGEIPLVSGTLIKVYGTRSYVPQSPWIQSGTVRENILFGKEMNKDFYESVLDGCALHQDINMWGDGDLNIVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLMQLLSEKTVVYATHQLEFLEAADLILVMKDGKIVESGRYKELIACPNCEFVRQMAAHEETINQINPWHEENSISCRPLQKNQIEVAEENLQESISNWKRNKEEEAETGRVKWSVYSTFVTSAYRGSLVPVILLCQILFQVMQMGSNYWISWAAEQTGRVTKGMLMGTFVLLSGGSSIFILGRTVLMAVVAVETAQRLFHGMITSVFRAPVSFFDTTPSSRILSRSSTDQSTIDTDIPYRLAGLVFALIQLLSIIMLMSQVAWQVILVFLVVFAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRCFNQEQIFMTKIKDLVDEYSRVAFHNYATMEWLSVRINFLFNLVFYFVLIILVTLPRSAIDPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPLIIQDCRPEPEWPMEGKIELQNIHIQYDPAGPMVLKGVTCTFPGRKKIGVVGRTGSGKSTLVQALFRVVEPLEGKILIDGVHISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHADKELWEVLKKCHLAEIVRQDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETSECTVITVAHRIPTVIDNDLVLVLDEGTIAEYDEPDQLLQNNTSSFSKLVSEFLRRSSPK | 1447 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu03g04508 | 1447 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 590 | 816 | IPR003439 | GO:0005524 | |
Adu03g04508 | 1447 | Coils | Coil | 841 | 868 | - | - | |
Adu03g04508 | 1447 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 613 | 806 | IPR027417 | - | |
Adu03g04508 | 1447 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1204 | 1438 | IPR003439 | GO:0005524 | |
Adu03g04508 | 1447 | CDD | ABCC_MRP_domain2 | 1202 | 1422 | - | - | |
Adu03g04508 | 1447 | SMART | AAA_5 | 619 | 793 | IPR003593 | - | |
Adu03g04508 | 1447 | SMART | AAA_5 | 1230 | 1421 | IPR003593 | - | |
Adu03g04508 | 1447 | CDD | ABC_6TM_ABCC_D1 | 276 | 563 | IPR044746 | GO:0140359 | |
Adu03g04508 | 1447 | PANTHER | OS01G0902100 PROTEIN | 108 | 1445 | - | - | |
Adu03g04508 | 1447 | Pfam | ABC transporter | 1221 | 1369 | IPR003439 | GO:0005524 | |
Adu03g04508 | 1447 | Pfam | ABC transporter | 614 | 745 | IPR003439 | GO:0005524 | |
Adu03g04508 | 1447 | SUPERFAMILY | ABC transporter transmembrane region | 891 | 1184 | IPR036640 | GO:0005524|GO:0016021 | |
Adu03g04508 | 1447 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 891 | 1167 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Adu03g04508 | 1447 | SUPERFAMILY | ABC transporter transmembrane region | 269 | 570 | IPR036640 | GO:0005524|GO:0016021 | |
Adu03g04508 | 1447 | ProSitePatterns | ABC transporters family signature. | 718 | 732 | IPR017871 | GO:0005524 | |
Adu03g04508 | 1447 | Gene3D | - | 1187 | 1440 | IPR027417 | - | |
Adu03g04508 | 1447 | Gene3D | ABC transporter type 1, transmembrane domain | 249 | 573 | IPR036640 | GO:0005524|GO:0016021 | |
Adu03g04508 | 1447 | Gene3D | ABC transporter type 1, transmembrane domain | 853 | 1185 | IPR036640 | GO:0005524|GO:0016021 | |
Adu03g04508 | 1447 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1196 | 1430 | IPR027417 | - | |
Adu03g04508 | 1447 | CDD | ABCC_MRP_domain1 | 588 | 793 | - | - | |
Adu03g04508 | 1447 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 275 | 555 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Adu03g04508 | 1447 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 108 | 1445 | - | - | |
Adu03g04508 | 1447 | CDD | ABC_6TM_ABCC_D2 | 889 | 1179 | IPR044726 | GO:0140359 | |
Adu03g04508 | 1447 | Gene3D | - | 611 | 840 | IPR027417 | - | |
Adu03g04508 | 1447 | Pfam | ABC transporter transmembrane region | 276 | 542 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Adu03g04508 | 1447 | Pfam | ABC transporter transmembrane region | 893 | 1131 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu03g04508 | Adu-Chr3 | 134467607 | 134473610 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu03g04508 | 587 | 842 | Calmodulin-binding Proteins | AT2G36910 | 28.369 | 1.59e-21 | 100 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu03g04508 | - | - | adu:107481980 | 2753.01 |