Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04485 ATGAATCAAAAGCAGCTTGAGCCACTACCTTTGCTAAGCAGCTTCCTTGGTTCTTCAACATGTTCATCATCAGAACTAAATCAAAATCTGAAAGAAGATGTGACAGTGGCCTTACACATTGGGCTCCCTGACAATTCCCATGATAATCAAAATGTAGAACCTCTCCAAGCTCCAAATAATTACTGGATACCAACAGAAGAGCAGATTATAATTGGTTTCAGCCACTTCTCATGTCCTGTTTGCCCAAAAACCTTCAACCGCTACAACAATCTTCAGATGCATATGTGGGGACATGGGTCAGAATACAGAAGAGGGCCAGAGTCACTGAAAAGAACACATCCAAGGCCATTGTTGGAGATAGCATGCTACTGCTGCAAAGGAGGGTGCAAGAACAACATAGAGCATCCAAGAGCAAAGCCTCTGAAAGATTTCAGAACACTGCAAACACACTATAAGAGGAAGCATGGACCCAAACCCTTCTCATGCCGCAAGTGTGCAAAGAATCTGGCTGTGAAAGGTGACTGGAGAACTCATGAGAAGAACTGTGGCAAACGCTGGCTTTGTCTTTGTGGCTCTGACTTCAAACACAAGAGGTCTCTTAAGGATCATATCAAAGCTTTTGGCTTTGGTCATACTCCCTTCTCCTCTTCTTCTACTTCTTCTTCTCATTAA 672 0.433 MNQKQLEPLPLLSSFLGSSTCSSSELNQNLKEDVTVALHIGLPDNSHDNQNVEPLQAPNNYWIPTEEQIIIGFSHFSCPVCPKTFNRYNNLQMHMWGHGSEYRRGPESLKRTHPRPLLEIACYCCKGGCKNNIEHPRAKPLKDFRTLQTHYKRKHGPKPFSCRKCAKNLAVKGDWRTHEKNCGKRWLCLCGSDFKHKRSLKDHIKAFGFGHTPFSSSSTSSSH 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04485 223 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
Adu03g04485 223 PANTHER TESTA 1 PROTEIN, PUTATIVE-RELATED 5 219 - -
Adu03g04485 223 PANTHER ZINC FINGER PROTEIN WIP2 5 219 IPR043584 GO:0003700|GO:0010468
Adu03g04485 223 SUPERFAMILY beta-beta-alpha zinc fingers 71 99 IPR036236 -
Adu03g04485 223 Gene3D Classic Zinc Finger 75 98 - -
Adu03g04485 223 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04485 Adu-Chr3 134141065 134141806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04485 1 217 C2H2 Transcription Factor Family AT1G34790 56.917 3.03e-96 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu03g04485 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04485 - - cam:101514022 360.533