Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04471 ATGGAGGAGGAGGATGAGATCCAACCACAGGCGTGTAAGTTCCCCAGGCTCGCTAATGGCAGGACCGACCCCACCAACAACGCCAAGATAGGAGCAGCCTGGCACCATTCCTCCAGGATCATAAGGGTTTCTAGAGCTTCCGGCGGCAAAGATCGCCATAGCAAGGTAATGACCTCTAAGGGCCTCAGAGACAGAAGGGTCAGGCTCTCCGTCACCACCGCCATTCAGTTTTACGACCTCCAAGACCGATTGGGCTATGACCAGCCCAGCAAGGCCGTGGAGTGGCTCATCAAGTCTGCTCAAGACGCCATTGCCGAGCTTCCATCCTTGAACACCACCTTCCCTGAAACCCCGAAGCAACCGAGCGACGAGAAGAGGGGCGGTGCAGGCGCCGACGATGCGGACATAGAGATAGAGGAGCAGCAGAAGCAGAAGCAGAACAGCCAGAATATGTCACTTTCGAAGTCGGCTTGTAGCAGCACCTCAGAGACGAGCAAGGGGTCCGGGTTGTCCCTGTCTCGGTCGGATATCCGCGTGAAAGCGAGGGAGAGGGCAAGGGAGAGAGCGGCCAAGGAGAAGAAGAAAGACAAGTGCAACAACAATAACAACAATCAGCATCAGAATAGCCTTCTTCATCATCAGCAACATCAGCAGCAGCAGCATCACAACATGAACCCAATTTCTCCTTCGTTTACTGAGCTGCTCACAGGTGGCATCACCACTGCGGTTCCAACAACAACTAGTCCTACTTCTGATGAGCCTGCTGCTGCTCTCTTCCACAAAGCGGCAAGGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAATGGGGTTCAGCACCCATGGATTACTTCAACCAGGTTCTCGTAGGCCCCTCTTCATCTTCAAGAACCCACCAACACCAACACCAGATCCATACCCTAGCTGAGGCCATATCCTTTAATAATGATCAGCAGCAGCAGCAGCAGCACCACTACTCCTTCATCCCTGATCAGTTCATGCCAGCTGTGGTTACATCCTCTCACTCCCATAACCATCATCACAGTGCTGGCGACACTGATTACAACCTCAACTTCACCATTTCTCCGGCTTCTGTATCTGCTGCTTCTGCCTCTGGCCTTGCTGCTTACAACAACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCACATTTCTTGCCTCACCTCCAGAGGTTCTCGCTGCCTATGGACGGATCCACTGTTCCTTTCTTCATTGGAGCTGCCGCACCCACCGCTGCTCCGCCTCCTGCCATCGACAACCACCAACACCATCAGGCAAATCCAAGAACTCATGACCTTCCGGCCACTACCCTGGACTCGGAAGGTCGAGTACGAGGAGCAAGGCGTGCGTGGCTCAGAGCCTGGCTTCACCAAAATGGATGA 1401 0.5403 MEEEDEIQPQACKFPRLANGRTDPTNNAKIGAAWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSAQDAIAELPSLNTTFPETPKQPSDEKRGGAGADDADIEIEEQQKQKQNSQNMSLSKSACSSTSETSKGSGLSLSRSDIRVKARERARERAAKEKKKDKCNNNNNNQHQNSLLHHQQHQQQQHHNMNPISPSFTELLTGGITTAVPTTTSPTSDEPAAALFHKAARQQQQQQQQQQQWGSAPMDYFNQVLVGPSSSSRTHQHQHQIHTLAEAISFNNDQQQQQQHHYSFIPDQFMPAVVTSSHSHNHHHSAGDTDYNLNFTISPASVSAASASGLAAYNNNRGTLQSNSPSHFLPHLQRFSLPMDGSTVPFFIGAAAPTAAPPPAIDNHQHHQANPRTHDLPATTLDSEGRVRGARRAWLRAWLHQNG 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04471 466 MobiDBLite consensus disorder prediction 201 232 - -
Adu03g04471 466 ProSiteProfiles R domain profile. 175 193 IPR017888 -
Adu03g04471 466 MobiDBLite consensus disorder prediction 143 172 - -
Adu03g04471 466 MobiDBLite consensus disorder prediction 119 142 - -
Adu03g04471 466 Pfam TCP family transcription factor 48 195 IPR017887 -
Adu03g04471 466 MobiDBLite consensus disorder prediction 109 232 - -
Adu03g04471 466 PANTHER TRANSCRIPTION FACTOR TCP24 1 435 - -
Adu03g04471 466 MobiDBLite consensus disorder prediction 176 200 - -
Adu03g04471 466 ProSiteProfiles TCP domain profile. 49 107 IPR017887 -
Adu03g04471 466 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 435 IPR005333 GO:0003700
Adu03g04471 466 Coils Coil 131 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04471 Adu-Chr3 133966082 133970910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04471 34 431 TCP Transcription Factor Family AT4G18390 41.304 4.84e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu03g04471 TCP 5.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04471 - - lang:109362619 321.627