Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04464 ATGAGGAGGAACTGCAACTTAGAACTACGGCTTTTCCCTTCTCCTGCCTCCGACCACCGCTCCATGGAGGAAGAAGAAGCAGGAGGCAGTGAGAGTAGGAGTAGCCCTTTACAAGGACAACATACACCGCAATCACACCCACTCACCATATTCTACGATGGCAAGATTTCCGTTTGTGACGTCACTCATTCTCAGGCAAGATCCATCTTAATGCTTGCAAGAAAAGAATTGGAGGAAAGAGNNNNNNNNNNNNNNNNNNNACTGGGTCTTCAGTAG 276 0.4493 MRRNCNLELRLFPSPASDHRSMEEEEAGGSESRSSPLQGQHTPQSHPLTIFYDGKISVCDVTHSQARSILMLARKELEERXXXXXXXLGLQ 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04464 91 PANTHER - 1 81 - -
Adu03g04464 91 Coils Coil 74 80 - -
Adu03g04464 91 SMART tify_2 41 75 IPR010399 -
Adu03g04464 91 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 81 IPR040390 -
Adu03g04464 91 MobiDBLite consensus disorder prediction 1 48 - -
Adu03g04464 91 MobiDBLite consensus disorder prediction 31 47 - -
Adu03g04464 91 ProSiteProfiles Tify domain profile. 41 75 IPR010399 -
Adu03g04464 91 Coils Coil 88 91 - -
Adu03g04464 91 Pfam tify domain 43 73 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04464 Adu-Chr3 133917844 133918612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04464 1 80 Tify Gene Family AT1G30135 40.000 1.82e-12 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Adu03g04464 tify 2.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04464 - - gmx:100781356 87.0409