Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04443 ATGTCGACTAAAGGAATATGCGGATCCAAAGATGAGTTTCAGTTTACTTGCTATTGCCCTGATGGAACTAATCATTCTTTGGATTGTTCTCATCATCATAGAGTTGCTGCTGCTGTGCTTAGTGCAGTTATATTAGGCATTGCCTTTAGTCTCTATTACCGTCGATGGAAGAAGAATTTTCAAGATGTATCATTTATACCATCTCACAGCATGTCTTCTTTTTTAGAAGACACTGAAAAGGGACATCAAAAATACTCTGGACTCCAATTCTTTGCCTATAGAGAACTTCAAGAGGCCACAAACAACTTTGATTCAGACAGAGAACTAGGAGATGGAGGCTTTGGGAAAGTATATTTTGGAAAACTTGGAGACGGCCGTTTTGTTGCTGTGAAAAAGATGTATGAGAACAATTACAGGACAGTAGAGCAATTTATGAATGAAATTGAGATCTTAACAGGCTTGCGCCACCAAAATCTGGTATCATTGTATGGATGTAATTCCAGCCACAGCAGTGAATTAATGCTTGTCTACGAATATGTTTCGAACGGAACAGTTGCAGATCATCTCCACGGGCAGAAAGCGAAATCTGCGCCACAAGGCACACCTGGTTATGTTGATCCGGAGTACCACGAGTACTACCAGCTGACAGATAGAAGCGATGTATACAGCTTTGGAGTTGTGCTGATTGAGCTAATATCTTCAATGCGTGCAGTTGACATAACAAGGCATAGGCATGAGATCAATTTGTCCAACATGGCCATGAAGAAGATTCAGAGTGGTGCGTTGCATGAGATTGTAGACAAAAGCCTTGGATTCGAATCGGATTTGAGGGTAAGGAAGATGATCAATGGTGTTGCAGAGTTGGCATTTCGGTGCTTGCAGAGTTCTAAGGATATGAGGCCTTCAATGGTACAAGTGTTGGATACTTTGAAGGATATACAAAGTGATGGGAAATATAAAAGCAAACCAGAGGTGATGGATATATCAAAACAAGAAGATAACGATGCAACCCTGCTTAAGAACGAACCACCTCCACCTTCACCTGattcaaatgggaaagtatag 1065 0.4047 MSTKGICGSKDEFQFTCYCPDGTNHSLDCSHHHRVAAAVLSAVILGIAFSLYYRRWKKNFQDVSFIPSHSMSSFLEDTEKGHQKYSGLQFFAYRELQEATNNFDSDRELGDGGFGKVYFGKLGDGRFVAVKKMYENNYRTVEQFMNEIEILTGLRHQNLVSLYGCNSSHSSELMLVYEYVSNGTVADHLHGQKAKSAPQGTPGYVDPEYHEYYQLTDRSDVYSFGVVLIELISSMRAVDITRHRHEINLSNMAMKKIQSGALHEIVDKSLGFESDLRVRKMINGVAELAFRCLQSSKDMRPSMVQVLDTLKDIQSDGKYKSKPEVMDISKQEDNDATLLKNEPPPPSPDSNGKV 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04443 354 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Adu03g04443 354 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 197 351 IPR044652 -
Adu03g04443 354 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 196 IPR044652 -
Adu03g04443 354 Gene3D Phosphorylase Kinase; domain 1 74 178 - -
Adu03g04443 354 Pfam Protein tyrosine and serine/threonine kinase 106 194 IPR001245 GO:0004672|GO:0006468
Adu03g04443 354 Pfam Protein tyrosine and serine/threonine kinase 203 309 IPR001245 GO:0004672|GO:0006468
Adu03g04443 354 ProSiteProfiles Protein kinase domain profile. 103 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04443 354 Gene3D Transferase(Phosphotransferase) domain 1 179 337 - -
Adu03g04443 354 MobiDBLite consensus disorder prediction 317 337 - -
Adu03g04443 354 SUPERFAMILY Protein kinase-like (PK-like) 83 314 IPR011009 -
Adu03g04443 354 MobiDBLite consensus disorder prediction 317 354 - -
Adu03g04443 354 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 197 351 - -
Adu03g04443 354 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04443 Adu-Chr3 133455822 133458191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04443 35 350 Receptor kinase-like Gene Family AT1G25390 40.464 1.28e-80 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Adu03g04443 PK_Tyr_Ser-Thr 2.8e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04443 - - jre:109010677 293.123