Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04414 ATGGAGAATAACAACAACAAAAGAAACCCACTTCCCCATTTTCCACGTCTTACACTCATGCTCTTCCTTATTACGATGATGTTTCCTGTGACTGAAGAAGCTGCAGCACCAGTTTCTTCTTCCATCAAGACCGATGAACAGGCCCTTCTCATGTTCAAAAAGATGGTTCAAAAAGATGAAACTGGAGCTTTGTCAGGTTGGCAGCTCAACAGGAATCCATGCACCTGGTTTGGAGTTTCATGCACTCATGGAAGAGTCACTCAGCTTGATCTCAGTGGCCATGGTTTATCCGGAACCATCACTCTTGACCCTCTATCTTCTCTAGACATGTTGTCTGTTCTGAAACTTTCTCTCAATTCATTCTCTGTAAATTCCACTTCCTTGCTTACCCTCCCTTACAGTTTGACACAGCTTGATCTCTCTTTTGCCGGAGTTTCAGGTCCAATCCCTGACAACTTCTTCTCAAAGTGTCCAAATCTTGTTGTTGTGAACCTCTCTTACAACAACATGACTGGCCCTATCCCTGATAATTTCTTGCAAAATTCTGATAAGTTGCAGTCTCTTGATCTCTCTTCCAACAATTTATCAGGCTCAATATCTGGCCTCAAAATTGATTGCAACTCCTTGTTGCAGCTTGATCTATCTGAGAACCGTTTATCAGATTCAATTCCAATCTCTTTGTCAAACTGCACCAGCCTCAAGAGTTTAAACTTGGGGAACAATTTGATTTCTGGTGAGATTCCAAAGGCTTTGGGGAATCTGAACAGCCTACAGACTTTGGATCTTTCAAGGAATCAACTCATTGGTTGGATCCCTTTTGAGTTTGGAAATGTGTGTGCTTCCCTTGTCGAACTTAGGCTCTCTTTCAACAACCTTACAGGTTCAATACCATCAAGTTTCTCTTCTTGCACTTGGCTGCAGCTTCTTGATATATCCAACAACAACATGTCAGGTCCATTGCCAGATTCAATCTTTCATAATCTCGGATCATTGCAGGAATTAAGGCTGGGAAACAATGCAATCTCAGGGCCATTCCCATCTTCAATATCTTCCTGCAAGAAACTGAGGATTGTGGATTTTAGCTCAAACAAATTCTATGGATCTATCCCCAGAGATATATGTCCAGGTGCAGCATCACTTGAGGAGCTGAGGATGCCTGATAATCTCATAACTGGGGAAATTCCATCTCAACTGTCAAAATGCTCACAGTTAAAGACACTTGATTTTAGTCTCAACTATCTCAATGGTTCAATCCCTGAGGAGCTTGGACAGCTTGAGAATCTTGAGCAGCTGATAGCATGGTTCAATGGCTTGGAAGGTAAGATTCCACCAAAGTTGGGGAAATGCAAGAAGCTCAAGGATCTTATACTGAACAATAATCACTTAACTGGTGAAATTCCCAGTGAGTTGTTCAACTGCAGCAACCTTGAATGGATATCACTCACAAGCAATGAGCTCAGCGGTGAGATACCGCGCGAGTTTGGCCTATTGACAAGGCTGGCTGTTCTGCAGCTTGGAAACAACAGCTTCACCGGGCAGATACCGGGGGAGCTGGCCAACTGCAGCAGTTTGGTGTGGTTGGACTTGAACAGCAACAAGCTCACAGGTGAGATTCCACCAAGACTTGGAAGGCAGCAAGGAGCAAAGTCATTGTTTGGAATTTTGTCAGGAAACACTTTGGTGTTTGTGAGGAATGTTGGAAACTCGTGCAAAGGTGTTGGGGGTTTGTTGGAATTCTATGGAATAAGGCCTGAGAGACTCTTGCAGGTTCCAACACTGAGGACCTGTGATTTCACAAGGCTGTATTCAGGTCCTGTTCTTAGTCTTTTCACAAAGTATCAGACTCTGGAGTATCTTGATCTCTCCTACAACGAGCTCCGAGGAAGAATCCCCCAAGAATTCGGGGACATGGAGGCCCTGCAGGTTCTTGAGTTGTCTCACAATCAGTTATCTGGAGAAATCCCTTCAACATTAGGCCAGCTAAAGAATTTGGGAGTGTTTGATGCATCACACAATAGATTGCAGGGCCATATCCCTGACTCATTCTCAAACCTGTCATTCTTGGTGCAGATTGATCTATCAAACAATGAGTTAACAGGGGAGATTCCATCTAGAGGGCAATTGAGCACACTTCCAGCTTCTCAGTATGCAAACAATCCCGGTCTTTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAGAGGAGGCCATAGATCAGCAACTGCAGCATGGGCTAACAGCATTGTCATGGGGATTCTGATTTCTGTGGCCTCTGTTTGTATTTTGATCGTGTGGGCAATCGCGATGCGGGCGAGGAGGAAGGAGGCAGAGGAAGTGAAGATGCTTAATAGCTTGCAGGCATCACATGCTGCCACAACATGGAAGATTGACAAGGAGAAAGAGCCTCTAAGCATCAATGTTGCAACCTTTCAGAGGCAGCTTAGGAAGCTGAAATTCTCACAGCTGATCGAAGCAACCAATGGATTCTCAGCAGCAAGCCTAATTGGTTGTGGTGGCTTTGGTGAAGTGTTCAAGGCCACACTGAAGGACGGTTCAAGTGTTGCAATAAAGAAGCTGATTAGGCTGAGCTGCCAGGGTGATAGAGAATTCATGGCTGAGATGGAAACCTTGGGGAAGATCAAGCACAGAAACCTAGTCCCTCTGTTGGGATACTGCAAAGTTGGGGAAGAGAGGCTGCTTGTGTATGAGTACATGGAGTATGGAAGCCTGGAGGAGATGCTCCACGGCAGAACAAAGTCGCGGGACCGGCGAATCCTGACATGGGAAGAGAGGAAAAAGGTTGCAAGAGGTGCTGCGAAGGGACTTTGTTTCCTTCACCACAATTGCATCCCACACATAATACACAGAGACATGAAATCAAGCAATGTGCTGCTTGATCATGAAATGGAGTCAAGAGTGTCTGATTTCGGAATGGCAAGGCTCATAAGTGCACTTGACACCCATCTCAGCGTCAGCACATTGGCCGGAACACCTGGCTATGTTCCACCCGAGTACTACCAAAGCTTCAGGTGCACGGCAAAGGGAGATGTCTACTCTTTTGGAGTTGTCATGCTTGAATTGTTAACCGGGAAGCGCCCCACCGATAAGGAGGACTTTGGAGACACCAATTTGGTGGGATGGGCCAAGATGAAGGTTCGCCAAGGCACTCACATGGAAGTCATTGATCCTGATTTGCTTCAGGTTTGTCAAGGTTCAGATGAAGCTCAGCTGAATGAAGTTAAGGACATGCTTCGCTTCTTGGATATCACTTTGCAGTGCGTTGATGACTTGCCTTCTAAGAGGCCAAACATGTTGCAGGTTGTTGCCATGCTCAGAGACCTTCATCATGGAACCACCAACACTGCTTGA 3372 0.4517 MENNNNKRNPLPHFPRLTLMLFLITMMFPVTEEAAAPVSSSIKTDEQALLMFKKMVQKDETGALSGWQLNRNPCTWFGVSCTHGRVTQLDLSGHGLSGTITLDPLSSLDMLSVLKLSLNSFSVNSTSLLTLPYSLTQLDLSFAGVSGPIPDNFFSKCPNLVVVNLSYNNMTGPIPDNFLQNSDKLQSLDLSSNNLSGSISGLKIDCNSLLQLDLSENRLSDSIPISLSNCTSLKSLNLGNNLISGEIPKALGNLNSLQTLDLSRNQLIGWIPFEFGNVCASLVELRLSFNNLTGSIPSSFSSCTWLQLLDISNNNMSGPLPDSIFHNLGSLQELRLGNNAISGPFPSSISSCKKLRIVDFSSNKFYGSIPRDICPGAASLEELRMPDNLITGEIPSQLSKCSQLKTLDFSLNYLNGSIPEELGQLENLEQLIAWFNGLEGKIPPKLGKCKKLKDLILNNNHLTGEIPSELFNCSNLEWISLTSNELSGEIPREFGLLTRLAVLQLGNNSFTGQIPGELANCSSLVWLDLNSNKLTGEIPPRLGRQQGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFYGIRPERLLQVPTLRTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNELRGRIPQEFGDMEALQVLELSHNQLSGEIPSTLGQLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSNNELTGEIPSRGQLSTLPASQYANNPGLCXXXXXXXXXXPRGGHRSATAAWANSIVMGILISVASVCILIVWAIAMRARRKEAEEVKMLNSLQASHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGCGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRTKSRDRRILTWEERKKVARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLTGKRPTDKEDFGDTNLVGWAKMKVRQGTHMEVIDPDLLQVCQGSDEAQLNEVKDMLRFLDITLQCVDDLPSKRPNMLQVVAMLRDLHHGTTNTA 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04414 1123 SUPERFAMILY L domain-like 43 319 - -
Adu03g04414 1123 Gene3D Transferase(Phosphotransferase) domain 1 906 1122 - -
Adu03g04414 1123 Gene3D Ribonuclease Inhibitor 44 153 IPR032675 -
Adu03g04414 1123 Pfam Brassinosteroid receptor island domain 552 610 IPR045381 -
Adu03g04414 1123 SUPERFAMILY L domain-like 592 724 - -
Adu03g04414 1123 SUPERFAMILY Protein kinase-like (PK-like) 811 1112 IPR011009 -
Adu03g04414 1123 Pfam BspA type Leucine rich repeat region (6 copies) 279 390 IPR026906 -
Adu03g04414 1123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 954 966 IPR008271 GO:0004672|GO:0006468
Adu03g04414 1123 ProSitePatterns Protein kinases ATP-binding region signature. 836 859 IPR017441 GO:0005524
Adu03g04414 1123 Gene3D Phosphorylase Kinase; domain 1 789 905 - -
Adu03g04414 1123 Pfam Leucine rich repeat 609 650 IPR001611 GO:0005515
Adu03g04414 1123 Pfam Leucine rich repeat 135 195 IPR001611 GO:0005515
Adu03g04414 1123 Pfam Leucine rich repeat 209 267 IPR001611 GO:0005515
Adu03g04414 1123 Pfam Protein tyrosine and serine/threonine kinase 834 1111 IPR001245 GO:0004672|GO:0006468
Adu03g04414 1123 Gene3D - 555 611 - -
Adu03g04414 1123 PRINTS Leucine-rich repeat signature 185 198 - -
Adu03g04414 1123 PRINTS Leucine-rich repeat signature 254 267 - -
Adu03g04414 1123 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 32 1115 - -
Adu03g04414 1123 ProSiteProfiles Protein kinase domain profile. 830 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04414 1123 SMART serkin_6 830 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04414 1123 Pfam Leucine rich repeat N-terminal domain 43 81 IPR013210 -
Adu03g04414 1123 SUPERFAMILY RNI-like 246 550 - -
Adu03g04414 1123 Gene3D Ribonuclease Inhibitor 154 723 IPR032675 -
Adu03g04414 1123 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 32 1115 - -
Adu03g04414 1123 ProSiteProfiles Leucine-rich repeat profile. 184 206 IPR001611 GO:0005515
Adu03g04414 1123 SMART LRR_typ_2 328 352 IPR003591 -
Adu03g04414 1123 SMART LRR_typ_2 279 302 IPR003591 -
Adu03g04414 1123 SMART LRR_typ_2 449 473 IPR003591 -
Adu03g04414 1123 SMART LRR_typ_2 254 277 IPR003591 -
Adu03g04414 1123 SMART LRR_typ_2 637 661 IPR003591 -
Adu03g04414 1123 SMART LRR_typ_2 497 521 IPR003591 -
Adu03g04414 1123 SMART LRR_typ_2 522 545 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04414 Adu-Chr3 133138678 133142318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04414 45 1119 Receptor kinase-like Gene Family AT1G55610 48.930 0.0 997
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Adu03g04414 PK_Tyr_Ser-Thr 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04414 - - gmx:100789959 1891.7