Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04409 ATGTCTGTGGCTGCTCCAAGTTCCCTTTTGAAGGTGGAGGAGATACAAGGAAGAGGGAGGGGAATGGTTGCATCACAACCTCTTAAAGCCGGCCAAATTGTCCTTAGAGATTCTCCTATCCTGCTCTATTCTGCTTTGCCATTGATCCCGCAGTCTTTATCTTCGTCCTCCTCTACCCTAGCCTCCTCCTTCTGTGATCACTGCTTTAGAACCTTACCATCCTCTTTACAGGGCGATTCTTCATCTTCTGCAGTTTTGTGCCCTTCATGTAGACATTATCGTTTTTGCAGCTCTAATTGTCTCTCAAAGGCATTGAATTCATCTCATTCTTCTTGGGTATGTCAAGCATTGTCTCACTTCCAAGCCAACTCTCCTCTTCTTGGACATCCCCTTGAGCTTCAAGTCCAGGCTCAATTTCTCGTTGCTGCATACAATCTTGCCAATATCTCCCCCTCAGACTTTCAAATCTTGCTTTCTCTTCATGGTTCTCCTGATGACGCTACAATTTCTGCAGCTCAATTCCTACACCCTCTTATTTCATCCCTCTGCTCAATTGCTCCCATTGGTCTTCAGAATGTATTTTCTTTGGAACTCACCTCTGCGCTTCTGGCCAAGGACAAGCACAATGCCTTTGGCTTAATGCAGCCTGTTTCTGTTAATGATGGCCAGAGGTCTGTTAGAGCTTATGGTATATACCCCTATGCCTCCTTTTTTAACCACGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGATAGTAATCCACCAGATGGCAGTAATAATACTGACATTATTGTTAGGATGATTCATGATGTTCCCCAAGGCAGGGAGATCTGTTTGAGCTATTTCCCTGTCAATGAAAACTATGCTAGCAGGCAGAAGAGATTGATGGAAGACTATGGCTTCACCTGTAATTGTGATCGGTGTAATGTCGAATCAAATTGGTCAGATAATGATGACACTATCGAAGAAGATAATGCAGAGGATGGAGAAGAGGTTATGGATGAGGAGGACCAATATGAAAACATGGCAGCGTCAGATACAGACAATAATAATGATTTCCCACACGCATATTTCTTTTTAAGGTACATGTGTGATAGACCAAATTGCGGGGGAACTTTGGCTCCTCTACCCCCACAAGTTGATAGTCCATCTAATGTCATGGAATGTAATGTCTGTGGCAAATTGAAAAGTGATGATGAGCAAGATGAAGCTCCCATGGAGGACTGA 1233 0.4363 MSVAAPSSLLKVEEIQGRGRGMVASQPLKAGQIVLRDSPILLYSALPLIPQSLSSSSSTLASSFCDHCFRTLPSSLQGDSSSSAVLCPSCRHYRFCSSNCLSKALNSSHSSWVCQALSHFQANSPLLGHPLELQVQAQFLVAAYNLANISPSDFQILLSLHGSPDDATISAAQFLHPLISSLCSIAPIGLQNVFSLELTSALLAKDKHNAFGLMQPVSVNDGQRSVRAYGIYPYASFFNHDCLPNACRFDYVDSNPPDGSNNTDIIVRMIHDVPQGREICLSYFPVNENYASRQKRLMEDYGFTCNCDRCNVESNWSDNDDTIEEDNAEDGEEVMDEEDQYENMAASDTDNNNDFPHAYFFLRYMCDRPNCGGTLAPLPPQVDSPSNVMECNVCGKLKSDDEQDEAPMED 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04409 410 Gene3D - 124 210 - -
Adu03g04409 410 Pfam SET domain 19 283 IPR001214 GO:0005515
Adu03g04409 410 SUPERFAMILY SET domain 8 306 IPR046341 -
Adu03g04409 410 Gene3D SET domain 21 310 IPR046341 -
Adu03g04409 410 CDD SET_SMYD 208 310 - -
Adu03g04409 410 ProSiteProfiles SET domain profile. 8 284 IPR001214 GO:0005515
Adu03g04409 410 Gene3D - 64 123 - -
Adu03g04409 410 SMART set_7 8 290 IPR001214 GO:0005515
Adu03g04409 410 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 2 405 IPR044238 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04409 Adu-Chr3 133068764 133072049 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu03g04409 SET 9.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04409 - - gmx:100783406 655.21