Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04377 ATGGCTTCTCCAATGGGGTCATCATCAACGGCTGGTGGTGCTACTGATGGTACTGATGATGAGGGGCAAGATCGTCCTCAAAATTCTCGAAGGTTTTACCATCGTCACACTCCCCATCAGATAGCAAAGCTTGAGGAAGCGTTCAACGCATGTGCACATCCAAGTGATAGCATGCGGCGACAACTAGGCACAGAACTAGGGCTTGAACCCAGACAAGTCAAATTTTGGTTTCAGAATAGGAGGACCCAAGCAAAGGCTCAAGCTGATAGATCAAATAACTGTGCTCTTCGGCGAGAGAATGAGAGAATGATGGCAGAAAACTTGATGTTCAGAGAGTCCTTGAAGAGTGTAGTTTGCATAACTTGTGGTGGTCCAACCATAAGGGACGATGATTGCCACATTCGCTTGGAACAATTCAAGTTGGAAAATGATTTTCTCTATAGGAAAATGGGAGAGCTTCTTGCAAGTTACAACATCATAGGTGCAGATCAAGTAGTGTCCCCTCTGCAATTATCATCAGTGTTATCTTCTCTGGCCATCAGTGGTAGCATTACTACTCCTACTCCTACTCCTACTCCTACTCCTACCCCAGCAGCTGCAATACCATGTTTGATTGATCCTCAGATTGAAGCTTCTCTCTGCCAACGCTTCCATTCACTCTGCCGCCAAAACACTACTCTTATTCCTCCTCAAGGATCTCAAAGTAGCAATAGTATTATTCGTCCTTTTAATGGCGATCGTGATCATCAAGATATGATGCCTGCTCAATCTGCTGCTGCTACTCCGACTGCCGTCGCTGCTTCTGAAACCCAAATTGGTACGCCGGCTGCGGCGGTAGTGAGCTTCTTCACAGAGGAGGAGATAGTAAGAATGAAAGAGGCGGCGACTAAAGCCGTGGACGAAGTAGCGAGGCTTCTGCGGATGAACGAGCCTTTCTGGTTTAGGTCAACGGTTGATGGAAACTTCATTCTTCAGCGTCAAAGCTACGACGGCGTTTTCCACAATGTTGGCTTGAAGTGTGAAGCACGCAGAGAGGCATCAAAAGATTCACGAGTGGTGGCTATGAGCGGCAGGAAATTGGTTGATATGTTCTTAGATTCGGAAAAATGGGTTTCCCTTTTCCCAACAATGGTTAAAAAAGCAGACACAATCGAAGTACTCAACACCGGTTTGCCACAGACCCGAAGTGGAGCCTTGCAACTGATGTATGCAGATATACATATTCTTTCACCGTTACTTAGATCTCGGGAATTCTTTTTCCTGCGGTACTGTGTGCAAGTTGATGTAGGTGCATGGATCATAGCAGATGTCTCATTTGATTCCTCCAGATTCCTTCATTCCCTCACTTGGAAGCTTCCCTCTGGATGCTTAATCCACGACATGAACGATGGATATTCCACCATTACTTGGGTGGAACATGTGGAAATAAGTGACAGTATCCAAACGAATCCGATTTTTAGAGACCTAGTTTGTAGCAACAGTGCATTTGGAGCAGAAAGATGGATTTTGACACTCGAAAGGATGTGCGAGAGAATTGCATTCGCCTCAATGAACATGATGCCTAGTTGTGACAGTGGAGTGATTGCTTCACCTGAAGGACGAAAGAATGTGATGGAATTTTCTGAGAGGATGGTAAAGCTCTTTTGTGGGTCTCTGGACATGACAGGTAACATGGAGTTGCAATATGGGAAGAACAACAATGGTGTAAGAGTTGGTATTCGAAGAAGTATAGAGGCGGGTGTGCCTAAGGGCTTGATTGTCACTGCATCTACCTCCCTTTGGCTTCCTCTCTTGCCCCAAACACTCTTTAACTTTTTCAAAGATCCATCAACTAGACATCAGTGGGATGTTTTGTGCCATGGAAATCCAGTGACTCAGATTCAGCGCATCTCAAATGGAACTTTTTCTGATAACTTTACAACAATTCTTCGGCCTTATATCCCGACGGAGAACAACACGCTTCTTCTCCAAGAATGCTGCACGGATTTCTTGGGAAGCGTGGTGGTGTATGCTCCGGTTGATGTTGGAACAATAACTGCGGCAATCAACGGAGAGGACACCACCACGATGCCTATTCTCCCCTCCGGCTTCACCATATGCGGAGATGGATCTCCTCCGCGAGGAGCTTTCTTTGGCTGTGCGCTCCCTGAATCGAGACATTACGGTGGCTCCATACTAACGGTGACCGTACAGGTGCTAGTTAGCAACCAAAATGCGGTGGGGCAGTTCAACATGAACACCGTTGATGCTGTCAATGGACTCGCAGCCACCACTGTCAAGAAAATTAAAGCCGCCTTCAAGTGTCCCTGA 2310 0.4636 MASPMGSSSTAGGATDGTDDEGQDRPQNSRRFYHRHTPHQIAKLEEAFNACAHPSDSMRRQLGTELGLEPRQVKFWFQNRRTQAKAQADRSNNCALRRENERMMAENLMFRESLKSVVCITCGGPTIRDDDCHIRLEQFKLENDFLYRKMGELLASYNIIGADQVVSPLQLSSVLSSLAISGSITTPTPTPTPTPTPAAAIPCLIDPQIEASLCQRFHSLCRQNTTLIPPQGSQSSNSIIRPFNGDRDHQDMMPAQSAAATPTAVAASETQIGTPAAAVVSFFTEEEIVRMKEAATKAVDEVARLLRMNEPFWFRSTVDGNFILQRQSYDGVFHNVGLKCEARREASKDSRVVAMSGRKLVDMFLDSEKWVSLFPTMVKKADTIEVLNTGLPQTRSGALQLMYADIHILSPLLRSREFFFLRYCVQVDVGAWIIADVSFDSSRFLHSLTWKLPSGCLIHDMNDGYSTITWVEHVEISDSIQTNPIFRDLVCSNSAFGAERWILTLERMCERIAFASMNMMPSCDSGVIASPEGRKNVMEFSERMVKLFCGSLDMTGNMELQYGKNNNGVRVGIRRSIEAGVPKGLIVTASTSLWLPLLPQTLFNFFKDPSTRHQWDVLCHGNPVTQIQRISNGTFSDNFTTILRPYIPTENNTLLLQECCTDFLGSVVVYAPVDVGTITAAINGEDTTTMPILPSGFTICGDGSPPRGAFFGCALPESRHYGGSILTVTVQVLVSNQNAVGQFNMNTVDAVNGLAATTVKKIKAAFKCP 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04377 769 MobiDBLite consensus disorder prediction 1 30 - -
Adu03g04377 769 Gene3D - 292 490 IPR023393 -
Adu03g04377 769 ProSiteProfiles 'Homeobox' domain profile. 27 87 IPR001356 GO:0003677
Adu03g04377 769 SUPERFAMILY Homeodomain-like 13 86 IPR009057 -
Adu03g04377 769 SMART START_1 293 511 IPR002913 GO:0008289
Adu03g04377 769 SMART HOX_1 29 91 IPR001356 GO:0003677
Adu03g04377 769 MobiDBLite consensus disorder prediction 1 16 - -
Adu03g04377 769 Gene3D - 16 105 - -
Adu03g04377 769 CDD homeodomain 30 87 IPR001356 GO:0003677
Adu03g04377 769 SUPERFAMILY Bet v1-like 285 512 - -
Adu03g04377 769 SUPERFAMILY Bet v1-like 538 736 - -
Adu03g04377 769 ProSiteProfiles START domain profile. 284 514 IPR002913 GO:0008289
Adu03g04377 769 CDD START_ArGLABRA2_like 289 510 - -
Adu03g04377 769 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 23 767 - -
Adu03g04377 769 Pfam Homeodomain 30 85 IPR001356 GO:0003677
Adu03g04377 769 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 23 767 IPR042160 -
Adu03g04377 769 Pfam START domain 296 511 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04377 Adu-Chr3 132742610 132752999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04377 30 769 Homeobox Transcription Factor Family AT1G73360 37.683 6.82e-162 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu03g04377 START 1.1e-25 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04377 K09338 - thj:104821159 551.206